Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os03t0640800-01 | |
| Os12t0612700-01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G12980.1 | Os03t0640800-01 | AT1G30490.1 | 17376809 |
| AT1G12980.1 | Os12t0612700-01 | AT1G30490.1 | 17376809 |
| AT1G12980.1 | Os03t0640800-01 | AT1G30490.1 | 18830673 |
| AT1G12980.1 | Os12t0612700-01 | AT1G30490.1 | 18830673 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G053460.1 | Barley | nucleus | 33.33 | 64.97 |
| TraesCS6B01G237700.1 | Wheat | nucleus | 52.75 | 61.07 |
| TraesCS6D01G192200.1 | Wheat | nucleus | 52.17 | 60.4 |
| TraesCS6A01G208700.1 | Wheat | nucleus | 51.59 | 59.53 |
| Zm00001d050948_P001 | Maize | nucleus | 46.09 | 54.08 |
| EES05354 | Sorghum | nucleus | 47.54 | 52.9 |
| Os06t0691100-00 | Rice | nucleus | 20.87 | 38.3 |
| Os04t0669200-01 | Rice | nucleus | 18.55 | 33.68 |
| Os05t0497200-01 | Rice | nucleus | 16.81 | 30.69 |
| GSMUA_Achr3P19420_001 | Banana | nucleus | 23.77 | 28.87 |
| Os08t0173700-01 | Rice | nucleus | 14.49 | 28.57 |
| Os05t0497300-01 | Rice | nucleus | 19.42 | 28.39 |
| Os01t0797600-01 | Rice | nucleus, plastid | 19.13 | 28.09 |
| Os04t0610400-01 | Rice | nucleus | 17.68 | 27.48 |
| Os02t0520000-00 | Rice | nucleus | 18.84 | 27.2 |
| Os04t0399800-00 | Rice | nucleus | 19.42 | 22.95 |
| GSMUA_Achr9P01870_001 | Banana | nucleus | 19.13 | 22.92 |
| GSMUA_AchrUn_... | Banana | nucleus | 18.26 | 22.5 |
| PGSC0003DMT400011492 | Potato | nucleus | 15.94 | 21.65 |
| PGSC0003DMT400008830 | Potato | nucleus | 15.94 | 21.65 |
| CDY16048 | Canola | nucleus | 17.68 | 20.89 |
| CDY19407 | Canola | nucleus | 19.13 | 20.89 |
| Bra026942.1-P | Field mustard | nucleus | 17.68 | 20.75 |
| CDY26605 | Canola | nucleus | 17.68 | 20.75 |
| Bra019801.1-P | Field mustard | nucleus | 19.13 | 20.31 |
| AT1G12980.1 | Thale cress | nucleus | 18.55 | 19.51 |
| Os07t0669500-01 | Rice | nucleus, plastid | 17.1 | 18.55 |
| KRH74517 | Soybean | nucleus | 17.68 | 16.8 |
| KRG99434 | Soybean | nucleus | 17.1 | 16.67 |
| KRH45585 | Soybean | nucleus | 17.1 | 16.67 |
| VIT_00s0291g00030.t01 | Wine grape | nucleus | 19.42 | 16.18 |
| KRH69639 | Soybean | nucleus | 18.26 | 16.11 |
| Solyc05g013540.1.1 | Tomato | nucleus | 17.97 | 16.06 |
| PGSC0003DMT400047887 | Potato | nucleus | 17.68 | 15.64 |
| CDX98022 | Canola | nucleus | 4.06 | 7.07 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | EntrezGene:4329849 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | ProteinID:BAD16814.1 |
| ProteinID:BAD16895.1 | ProteinID:BAF09219.1 | ProteinID:BAS79537.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 | EnsemblPlantsGene:Os02g0594300 | EnsemblPlants:Os02t0594300-00 |
| PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31677 | PANTHER:PTHR31677:SF40 | UniProt:Q6ZH77 |
| SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI000035ACFD | RefSeq:XP_015624483.1 | SEG:seg | : |
Description
ETHYLENE RESPONSE FACTOR 79Similar to Enhancer of shoot regeneration ESR1. (Os02t0594300-00)
Coordinates
chr2:+:23024797..23025834
Molecular Weight (calculated)
35947.6 Da
IEP (calculated)
7.574
GRAVY (calculated)
-0.606
Length
345 amino acids
Sequence
(BLAST)
(BLAST)
001: MQAQQAMDEP ANAQLYGHAH AHSHHHRSKR PSPGGGGGGA ATLGADGGGG GGSLSGTRYR GVRRRPWGRF AAEIRDPASK ERRWLGTFDT AEQAACAYDV
101: AARAMRGTRA RTNFPVPAAA GFPGGGGGGC WPWVNIPPQG AAAAASHQQP LNTLLLHNLL MSSSPHGCLL LHHAGHGHGH AHSHSHSHSR AHNPSTRPPT
201: SAPPPPPPAA ASSATTAPAT TTGAAATSAP GADDDAWGFL LRREPPEAGL LQDVLHGFYP TRRPHDDAGP APKLERPYEA TSSYRVSSPW GAVEDCDDGD
301: GDGDDDYRGF PMMPQGLLED VIQCPPYMEV LAAPSAAVGR VSRRG
101: AARAMRGTRA RTNFPVPAAA GFPGGGGGGC WPWVNIPPQG AAAAASHQQP LNTLLLHNLL MSSSPHGCLL LHHAGHGHGH AHSHSHSHSR AHNPSTRPPT
201: SAPPPPPPAA ASSATTAPAT TTGAAATSAP GADDDAWGFL LRREPPEAGL LQDVLHGFYP TRRPHDDAGP APKLERPYEA TSSYRVSSPW GAVEDCDDGD
301: GDGDDDYRGF PMMPQGLLED VIQCPPYMEV LAAPSAAVGR VSRRG
001: MEEAIMRLEG AEHRETNIHS LKRKPSRTSS TAPGSPGGVT TAKAASGAGA SGVSTIRYRG VRRRPWGRYA AEIRDPLSKE RRWLGTFDTA EEAACAYDCA
101: ARAMRGLKAR TNFVYPMPSL DSYHHRIFSS PPMNMFLLRD VLNSQSLSPL TTFAYPPCNL SNVNDVVHES FTNVNDVCED LSPKAKRSST IENESLISNI
201: FEPEPASSGL LQEIVQGFLP KPISQHASIP PKSNQQSVGV FPTMPESGFQ TDVRLADFHV EGNGFGQVKY HGELGWADHE NGFDSAKMQQ NGNGGMFYQY
301: CFHDDY
101: ARAMRGLKAR TNFVYPMPSL DSYHHRIFSS PPMNMFLLRD VLNSQSLSPL TTFAYPPCNL SNVNDVVHES FTNVNDVCED LSPKAKRSST IENESLISNI
201: FEPEPASSGL LQEIVQGFLP KPISQHASIP PKSNQQSVGV FPTMPESGFQ TDVRLADFHV EGNGFGQVKY HGELGWADHE NGFDSAKMQQ NGNGGMFYQY
301: CFHDDY
Arabidopsis Description
ESR2Ethylene-responsive transcription factor ESR2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYK5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.