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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • plastid 1
  • mitochondrion 1
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra032394.1-P

Inferred from Arabidopsis experimental PPI

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX98022 Canola nucleus 60.0 98.48
CDY19407 Canola nucleus 89.85 92.41
Bra026942.1-P Field mustard nucleus 56.0 61.9
AT1G12980.1 Thale cress nucleus 60.92 60.37
Bra030095.1-P Field mustard nucleus 18.46 35.71
Bra032900.1-P Field mustard nucleus 17.23 35.44
Bra010880.1-P Field mustard nucleus 18.46 34.88
Bra032901.1-P Field mustard nucleus 17.23 34.57
Bra027270.1-P Field mustard nucleus 16.31 33.12
Bra015266.1-P Field mustard nucleus 17.54 31.15
HORVU6Hr1G053460.1 Barley nucleus 16.92 31.07
Bra010972.1-P Field mustard nucleus 28.62 30.9
Bra039658.1-P Field mustard nucleus 16.62 30.68
Bra012499.1-P Field mustard nucleus 27.69 30.51
Bra030957.1-P Field mustard nucleus 17.54 30.16
Bra032898.1-P Field mustard nucleus 16.31 29.28
Bra010881.1-P Field mustard nucleus 16.31 28.8
Bra030094.1-P Field mustard nucleus 15.69 28.65
Bra001588.1-P Field mustard nucleus 18.15 27.96
GSMUA_AchrUn_... Banana nucleus 24.0 27.86
GSMUA_Achr9P01870_001 Banana nucleus 24.0 27.08
Bra006222.1-P Field mustard nucleus 17.54 27.01
Bra036016.1-P Field mustard nucleus 16.0 26.94
Bra021594.1-P Field mustard nucleus 17.54 26.76
Bra018864.1-P Field mustard nucleus 16.62 26.6
Bra003701.1-P Field mustard nucleus 15.69 26.15
Bra010901.1-P Field mustard nucleus 18.77 26.07
Bra026949.1-P Field mustard nucleus 17.54 25.79
GSMUA_Achr3P19420_001 Banana nucleus 22.46 25.7
Bra030076.1-P Field mustard nucleus 18.77 25.31
Bra038107.1-P Field mustard nucleus 15.38 25.0
Bra001784.1-P Field mustard nucleus 16.0 24.19
Bra006325.1-P Field mustard nucleus 14.46 23.98
Bra002168.1-P Field mustard nucleus, plastid 23.38 23.97
Bra006466.1-P Field mustard nucleus, plastid 22.77 23.87
Bra038261.1-P Field mustard nucleus 16.31 23.66
Bra023684.1-P Field mustard nucleus, plastid 22.46 23.32
Bra035792.1-P Field mustard mitochondrion, nucleus 16.0 23.11
Zm00001d050948_P001 Maize nucleus 19.69 21.77
EES05354 Sorghum nucleus 20.62 21.61
TraesCS6B01G237700.1 Wheat nucleus 19.69 21.48
TraesCS6D01G192200.1 Wheat nucleus 19.69 21.48
TraesCS6A01G208700.1 Wheat nucleus 19.69 21.4
Os02t0594300-00 Rice nucleus 20.31 19.13
Bra008793.1-P Field mustard nucleus 17.23 17.45
Bra023440.1-P Field mustard nucleus 17.23 16.62
Bra032881.1-P Field mustard nucleus 2.77 6.25
Protein Annotations
MapMan:15.5.7.1Gene3D:3.30.730.10InterPro:AP2/ERF_domInterPro:AP2/ERF_dom_sfEnsemblPlantsGene:Bra019801EnsemblPlants:Bra019801.1
EnsemblPlants:Bra019801.1-PInterPro:DNA-bd_dom_sfGO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0003700
GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139
GO:GO:0006351GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987
InterPro:IPR001471InterPro:IPR036955UniProt:M4DTF8PFAM:PF00847PRINTS:PR00367PFscan:PS51032
PANTHER:PTHR31677PANTHER:PTHR31677:SF9SMART:SM00380SUPFAM:SSF54171UniParc:UPI000253EC66SEG:seg
Description
AT1G12980 (E=1e-066) ESR1, DRN | ESR1 (ENHANCER OF SHOOT REGENERATION 1); DNA binding / protein binding / transcription factor
Coordinates
chrA06:-:4329045..4330022
Molecular Weight (calculated)
36157.6 Da
IEP (calculated)
8.384
GRAVY (calculated)
-0.784
Length
325 amino acids
Sequence
(BLAST)
001: MEEALRKFSE STHSLIPGYE PDQYPLTRNF TNTKSSNRKP ASKETRVTSL GTGNATTRYR GVRRRPWGRY AAEIRDPTSK ERRWLGTFDT AEQAACAYDC
101: AARAFRGSKA RTNFTYPVAV AVPEHRFPFF PKKSLTSARS SVPLDHSTHE FYGTPAPQKI NNDASYSSRK TAPFNSLNGS SSFYSYSQPK TASVSSSVYD
201: YDTEFFPQES SDSGLLEEVV KEFLKKNRNH PLPPPPPMIG DLESTGGDLS ALSNVSDSFF QQTTEPITWT LEGHGNNNQA GGYGYFNGAI PAADSDFTYG
301: SEAWGYQEML MYGGQLGCTY RKPWG
Best Arabidopsis Sequence Match ( AT1G12980.1 )
(BLAST)
001: MEKALRNFTE STHSPDPNPL TKFFTEPTAS PVSRNRKLSS KDTTVTIAGA GSSTTRYRGV RRRPWGRYAA EIRDPMSKER RWLGTFDTAE QAACAYDSAA
101: RAFRGAKART NFTYPTAVIM PEPRFSFSNK KSSPSARCPL PSLPLDSSTQ NFYGAPAAQR IYNTQSIFLR DASCSSRKTT PYNNSFNGSS SSYSASKTAC
201: VSYSENENNE SFFPEESSDT GLLQEVVQEF LKKNRGVPPS PPTPPPVTSH HDNSGYFSNL TIYSENMVQE TKETLSSKLD RYGNFQANDD GVRAVADGGL
301: SLGSNEWGYQ EMLMYGTQLG CTCRRSWG
Arabidopsis Description
ESR1Ethylene-responsive transcription factor ESR1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAD4]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.