Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
Inferred distinct locusB in Crop
locusB | locations |
---|---|
Bra032394.1-P |
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT1G12980.1 | Bra032394.1-P | AT1G30490.1 | 17376809 |
AT1G12980.1 | Bra032394.1-P | AT1G30490.1 | 18830673 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDX98022 | Canola | nucleus | 60.0 | 98.48 |
CDY19407 | Canola | nucleus | 89.85 | 92.41 |
Bra026942.1-P | Field mustard | nucleus | 56.0 | 61.9 |
AT1G12980.1 | Thale cress | nucleus | 60.92 | 60.37 |
Bra030095.1-P | Field mustard | nucleus | 18.46 | 35.71 |
Bra032900.1-P | Field mustard | nucleus | 17.23 | 35.44 |
Bra010880.1-P | Field mustard | nucleus | 18.46 | 34.88 |
Bra032901.1-P | Field mustard | nucleus | 17.23 | 34.57 |
Bra027270.1-P | Field mustard | nucleus | 16.31 | 33.12 |
Bra015266.1-P | Field mustard | nucleus | 17.54 | 31.15 |
HORVU6Hr1G053460.1 | Barley | nucleus | 16.92 | 31.07 |
Bra010972.1-P | Field mustard | nucleus | 28.62 | 30.9 |
Bra039658.1-P | Field mustard | nucleus | 16.62 | 30.68 |
Bra012499.1-P | Field mustard | nucleus | 27.69 | 30.51 |
Bra030957.1-P | Field mustard | nucleus | 17.54 | 30.16 |
Bra032898.1-P | Field mustard | nucleus | 16.31 | 29.28 |
Bra010881.1-P | Field mustard | nucleus | 16.31 | 28.8 |
Bra030094.1-P | Field mustard | nucleus | 15.69 | 28.65 |
Bra001588.1-P | Field mustard | nucleus | 18.15 | 27.96 |
GSMUA_AchrUn_... | Banana | nucleus | 24.0 | 27.86 |
GSMUA_Achr9P01870_001 | Banana | nucleus | 24.0 | 27.08 |
Bra006222.1-P | Field mustard | nucleus | 17.54 | 27.01 |
Bra036016.1-P | Field mustard | nucleus | 16.0 | 26.94 |
Bra021594.1-P | Field mustard | nucleus | 17.54 | 26.76 |
Bra018864.1-P | Field mustard | nucleus | 16.62 | 26.6 |
Bra003701.1-P | Field mustard | nucleus | 15.69 | 26.15 |
Bra010901.1-P | Field mustard | nucleus | 18.77 | 26.07 |
Bra026949.1-P | Field mustard | nucleus | 17.54 | 25.79 |
GSMUA_Achr3P19420_001 | Banana | nucleus | 22.46 | 25.7 |
Bra030076.1-P | Field mustard | nucleus | 18.77 | 25.31 |
Bra038107.1-P | Field mustard | nucleus | 15.38 | 25.0 |
Bra001784.1-P | Field mustard | nucleus | 16.0 | 24.19 |
Bra006325.1-P | Field mustard | nucleus | 14.46 | 23.98 |
Bra002168.1-P | Field mustard | nucleus, plastid | 23.38 | 23.97 |
Bra006466.1-P | Field mustard | nucleus, plastid | 22.77 | 23.87 |
Bra038261.1-P | Field mustard | nucleus | 16.31 | 23.66 |
Bra023684.1-P | Field mustard | nucleus, plastid | 22.46 | 23.32 |
Bra035792.1-P | Field mustard | mitochondrion, nucleus | 16.0 | 23.11 |
Zm00001d050948_P001 | Maize | nucleus | 19.69 | 21.77 |
EES05354 | Sorghum | nucleus | 20.62 | 21.61 |
TraesCS6B01G237700.1 | Wheat | nucleus | 19.69 | 21.48 |
TraesCS6D01G192200.1 | Wheat | nucleus | 19.69 | 21.48 |
TraesCS6A01G208700.1 | Wheat | nucleus | 19.69 | 21.4 |
Os02t0594300-00 | Rice | nucleus | 20.31 | 19.13 |
Bra008793.1-P | Field mustard | nucleus | 17.23 | 17.45 |
Bra023440.1-P | Field mustard | nucleus | 17.23 | 16.62 |
Bra032881.1-P | Field mustard | nucleus | 2.77 | 6.25 |
Protein Annotations
MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | EnsemblPlantsGene:Bra019801 | EnsemblPlants:Bra019801.1 |
EnsemblPlants:Bra019801.1-P | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
InterPro:IPR001471 | InterPro:IPR036955 | UniProt:M4DTF8 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 |
PANTHER:PTHR31677 | PANTHER:PTHR31677:SF9 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI000253EC66 | SEG:seg |
Description
AT1G12980 (E=1e-066) ESR1, DRN | ESR1 (ENHANCER OF SHOOT REGENERATION 1); DNA binding / protein binding / transcription factor
Coordinates
chrA06:-:4329045..4330022
Molecular Weight (calculated)
36157.6 Da
IEP (calculated)
8.384
GRAVY (calculated)
-0.784
Length
325 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEALRKFSE STHSLIPGYE PDQYPLTRNF TNTKSSNRKP ASKETRVTSL GTGNATTRYR GVRRRPWGRY AAEIRDPTSK ERRWLGTFDT AEQAACAYDC
101: AARAFRGSKA RTNFTYPVAV AVPEHRFPFF PKKSLTSARS SVPLDHSTHE FYGTPAPQKI NNDASYSSRK TAPFNSLNGS SSFYSYSQPK TASVSSSVYD
201: YDTEFFPQES SDSGLLEEVV KEFLKKNRNH PLPPPPPMIG DLESTGGDLS ALSNVSDSFF QQTTEPITWT LEGHGNNNQA GGYGYFNGAI PAADSDFTYG
301: SEAWGYQEML MYGGQLGCTY RKPWG
101: AARAFRGSKA RTNFTYPVAV AVPEHRFPFF PKKSLTSARS SVPLDHSTHE FYGTPAPQKI NNDASYSSRK TAPFNSLNGS SSFYSYSQPK TASVSSSVYD
201: YDTEFFPQES SDSGLLEEVV KEFLKKNRNH PLPPPPPMIG DLESTGGDLS ALSNVSDSFF QQTTEPITWT LEGHGNNNQA GGYGYFNGAI PAADSDFTYG
301: SEAWGYQEML MYGGQLGCTY RKPWG
001: MEKALRNFTE STHSPDPNPL TKFFTEPTAS PVSRNRKLSS KDTTVTIAGA GSSTTRYRGV RRRPWGRYAA EIRDPMSKER RWLGTFDTAE QAACAYDSAA
101: RAFRGAKART NFTYPTAVIM PEPRFSFSNK KSSPSARCPL PSLPLDSSTQ NFYGAPAAQR IYNTQSIFLR DASCSSRKTT PYNNSFNGSS SSYSASKTAC
201: VSYSENENNE SFFPEESSDT GLLQEVVQEF LKKNRGVPPS PPTPPPVTSH HDNSGYFSNL TIYSENMVQE TKETLSSKLD RYGNFQANDD GVRAVADGGL
301: SLGSNEWGYQ EMLMYGTQLG CTCRRSWG
101: RAFRGAKART NFTYPTAVIM PEPRFSFSNK KSSPSARCPL PSLPLDSSTQ NFYGAPAAQR IYNTQSIFLR DASCSSRKTT PYNNSFNGSS SSYSASKTAC
201: VSYSENENNE SFFPEESSDT GLLQEVVQEF LKKNRGVPPS PPTPPPVTSH HDNSGYFSNL TIYSENMVQE TKETLSSKLD RYGNFQANDD GVRAVADGGL
301: SLGSNEWGYQ EMLMYGTQLG CTCRRSWG
Arabidopsis Description
ESR1Ethylene-responsive transcription factor ESR1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAD4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.