Factsheet for Bra039658.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY24111	Canola	nucleus	99.43	99.43
Bra030957.1-P	Field mustard	nucleus	72.16	67.2
Bra027270.1-P	Field mustard	nucleus	57.95	63.75
AT1G53170.1	Thale cress	nucleus	60.23	57.3
Bra001588.1-P	Field mustard	nucleus	60.23	50.24
Bra021594.1-P	Field mustard	nucleus	60.23	49.77
KRH55195	Soybean	nucleus	47.73	45.9
Bra003701.1-P	Field mustard	nucleus	49.43	44.62
KRH27281	Soybean	nucleus	48.3	44.04
KRH22040	Soybean	nucleus	48.3	44.04
Bra038107.1-P	Field mustard	nucleus	49.43	43.5
Bra010880.1-P	Field mustard	nucleus	42.05	43.02
Bra030095.1-P	Field mustard	nucleus	40.34	42.26
Bra032900.1-P	Field mustard	nucleus	37.5	41.77
Bra032901.1-P	Field mustard	nucleus	36.93	40.12
Bra036016.1-P	Field mustard	nucleus	40.91	37.31
Bra015266.1-P	Field mustard	nucleus	38.07	36.61
Bra032898.1-P	Field mustard	nucleus	35.8	34.81
Bra006325.1-P	Field mustard	nucleus	37.5	33.67
Bra030094.1-P	Field mustard	nucleus	33.52	33.15
Bra018864.1-P	Field mustard	nucleus	38.07	33.0
Bra010881.1-P	Field mustard	nucleus	33.52	32.07
Bra001784.1-P	Field mustard	nucleus	37.5	30.7
Bra035792.1-P	Field mustard	mitochondrion, nucleus	38.07	29.78
Bra038261.1-P	Field mustard	nucleus	37.5	29.46
Bra006222.1-P	Field mustard	nucleus	26.7	22.27
Bra026949.1-P	Field mustard	nucleus	27.84	22.17
Bra030076.1-P	Field mustard	nucleus	26.7	19.5
Bra010901.1-P	Field mustard	nucleus	25.0	18.8
Bra026942.1-P	Field mustard	nucleus	30.11	18.03
Bra019801.1-P	Field mustard	nucleus	30.68	16.62
Bra012499.1-P	Field mustard	nucleus	27.84	16.61
Bra010972.1-P	Field mustard	nucleus	27.84	16.28
Bra008793.1-P	Field mustard	nucleus	27.27	14.95
Bra006466.1-P	Field mustard	nucleus, plastid	26.14	14.84
Bra002168.1-P	Field mustard	nucleus, plastid	26.7	14.83
Bra023440.1-P	Field mustard	nucleus	27.27	14.24
Bra023684.1-P	Field mustard	nucleus, plastid	25.0	14.06
Bra032881.1-P	Field mustard	nucleus	3.41	4.17

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF-transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	EnsemblPlantsGene:Bra039658
EnsemblPlants:Bra039658.1	EnsemblPlants:Bra039658.1-P	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	UniProt:M4FEY6	PFAM:PF00847	PIRSF:PIRSF038123
PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31190	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000253E7FC
SEG:seg	:	:	:	:	:

Description

AT3G15210 (E=4e-023) ATERF-4, ERF4, RAP2.5, ATERF4 | ERF4 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 4); DNA binding / protein binding / transcription factor/ transcription repressor

Coordinates

chrA06:+:684715..685245

Molecular Weight (calculated)

19145.7 Da

IEP (calculated)

10.454

GRAVY (calculated)

-0.693

Length

176 amino acids

Sequence
(BLAST)

001: MKTGLKPDPN PVERNEKEVR YRGVRKRPWG RFAAEIRDPV KRTRVWLGTF DTAENAARAY DAAARDFRGP KAKTNFPPTV LELNANKEGR FARSPSQSST
101: VDSVSPTGRR LAALPQLELS LGGGGSGGGA CYDQVPVARP LYFYNNMKAF SPAGTCGGEK KPQPLNLDLT LAPPAE

Best Arabidopsis Sequence Match ( AT1G53170.1 )
(BLAST)

001: MPNITMGLKP DPVAPTNPTH HESNAAKEIR YRGVRKRPWG RYAAEIRDPV KKTRVWLGTF DTAQQAARAY DAAARDFRGV KAKTNFGVIV GSSPTQSSTV
101: VDSPTAARFI TPPHLELSLG GGGACRRKIP LVHPVYYYNM ATYPKMTTCG VQSESETSSV VDFEGGAGKI SPPLDLDLNL APPAE

Arabidopsis Description

ERF8Ethylene-responsive transcription factor 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAI5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.