Factsheet for Bra003701.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra004926.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G15210.1	Bra004926.1-P	AT2G45640.1	16429262

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY32314	Canola	nucleus	86.15	77.06
Bra021594.1-P	Field mustard	nucleus	83.08	76.06
Bra027270.1-P	Field mustard	nucleus	60.51	73.75
Bra001588.1-P	Field mustard	nucleus	72.31	66.82
AT3G15210.1	Thale cress	nucleus	71.28	62.61
Bra030957.1-P	Field mustard	nucleus	53.33	55.03
Bra039658.1-P	Field mustard	nucleus	44.62	49.43
KRH26242	Soybean	nucleus	27.69	41.86
Bra010880.1-P	Field mustard	nucleus	36.41	41.28
Bra030095.1-P	Field mustard	nucleus	34.87	40.48
Bra032900.1-P	Field mustard	nucleus	30.77	37.97
Bra032901.1-P	Field mustard	nucleus	29.74	35.8
Bra038107.1-P	Field mustard	nucleus	36.41	35.5
Bra015266.1-P	Field mustard	nucleus	30.77	32.79
Bra036016.1-P	Field mustard	nucleus	30.77	31.09
Bra032898.1-P	Field mustard	nucleus	28.72	30.94
Bra030094.1-P	Field mustard	nucleus	28.21	30.9
Bra010881.1-P	Field mustard	nucleus	28.72	30.43
Bra018864.1-P	Field mustard	nucleus	31.28	30.05
Bra001784.1-P	Field mustard	nucleus	32.82	29.77
Bra035792.1-P	Field mustard	mitochondrion, nucleus	32.82	28.44
Bra038261.1-P	Field mustard	nucleus	32.31	28.12
Bra006325.1-P	Field mustard	nucleus	28.21	28.06
Bra026949.1-P	Field mustard	nucleus	25.64	22.62
Bra006222.1-P	Field mustard	nucleus	23.59	21.8
Bra010901.1-P	Field mustard	nucleus	22.56	18.8
Bra030076.1-P	Field mustard	nucleus	23.08	18.67
Bra026942.1-P	Field mustard	nucleus	27.69	18.37
Bra012499.1-P	Field mustard	nucleus	25.64	16.95
Bra010972.1-P	Field mustard	nucleus	25.64	16.61
Bra002168.1-P	Field mustard	nucleus, plastid	26.15	16.09
Bra023684.1-P	Field mustard	nucleus, plastid	25.64	15.97
Bra006466.1-P	Field mustard	nucleus, plastid	25.13	15.81
Bra019801.1-P	Field mustard	nucleus	26.15	15.69
Bra008793.1-P	Field mustard	nucleus	24.62	14.95
Bra023440.1-P	Field mustard	nucleus	23.59	13.65
Bra032881.1-P	Field mustard	nucleus	1.54	2.08

Protein Annotations

Gene3D:3.30.730.10	MapMan:35.1	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	EnsemblPlantsGene:Bra003701	EnsemblPlants:Bra003701.1
EnsemblPlants:Bra003701.1-P	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	UniProt:M4CHL8	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR31677	PANTHER:PTHR31677:SF17	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI0002541549	SEG:seg

Description

AT3G15210 (E=2e-060) ATERF-4, ERF4, RAP2.5, ATERF4 | ERF4 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 4); DNA binding / protein binding / transcription factor/ transcription repressor

Coordinates

chrA07:-:14583348..14583935

Molecular Weight (calculated)

21282.5 Da

IEP (calculated)

9.206

GRAVY (calculated)

-0.285

Length

195 amino acids

Sequence
(BLAST)

001: MVKMGLKPEP VHSNAMEIRY RGVRKRPWGR YATEVRGPGK KTCVWLGTFD TTEAAARAYD KAAREFRGAK AKTNFPNFIE LSENVSVGGF ERSPSQTSTL
101: YCASPPAATP ATSDIVLPQL ELRLGGRGGA CYQILMARPV YYLDLMGIGN GVRAVQPPMS LACRSPVMHV TTKVACGGQS DSDSSSAVEF DWWIE

Best Arabidopsis Sequence Match ( AT3G15210.1 )
(BLAST)

001: MAKMGLKPDP ATTNQTHNNA KEIRYRGVRK RPWGRYAAEI RDPGKKTRVW LGTFDTAEEA ARAYDTAARD FRGAKAKTNF PTFLELSDQK VPTGFARSPS
101: QSSTLDCASP PTLVVPSATA GNVPPQLELS LGGGGGGSCY QIPMSRPVYF LDLMGIGNVG RGQPPPVTSA FRSPVVHVAT KMACGAQSDS DSSSVVDFEG
201: GMEKRSQLLD LDLNLPPPSE QA

Arabidopsis Description

ERF4Ethylene-responsive transcription factor 4 [Source:UniProtKB/Swiss-Prot;Acc:O80340]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.