Factsheet for Bra002168.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 6
plastid 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY68296	Canola	nucleus	95.27	93.5
CDY13901	Canola	nucleus	99.05	93.45
Bra023684.1-P	Field mustard	nucleus, plastid	84.86	85.94
Bra006466.1-P	Field mustard	nucleus, plastid	81.07	82.9
AT5G18560.1	Thale cress	nucleus	84.54	77.01
Bra006222.1-P	Field mustard	nucleus	22.08	33.18
Bra030095.1-P	Field mustard	nucleus	17.35	32.74
Solyc01g067540.1.1	Tomato	nucleus	32.81	32.4
Bra032900.1-P	Field mustard	nucleus	16.09	32.28
Zm00001d007119_P001	Maize	nucleus	29.97	32.09
TraesCS2D01G118200.1	Wheat	nucleus, plastid	29.65	31.86
Bra032901.1-P	Field mustard	nucleus	16.09	31.48
TraesCS2A01G116900.1	Wheat	nucleus	29.65	31.44
Bra010880.1-P	Field mustard	nucleus	17.03	31.4
Zm00001d022488_P001	Maize	nucleus	30.91	31.11
GSMUA_Achr8P30180_001	Banana	nucleus	29.97	30.45
TraesCS2B01G136100.1	Wheat	nucleus	29.34	30.29
Os07t0669500-01	Rice	nucleus, plastid	30.28	30.19
KXG36907	Sorghum	nucleus	30.91	29.97
PGSC0003DMT400058356	Potato	nucleus	32.18	29.91
Bra026949.1-P	Field mustard	nucleus	20.5	29.41
Bra027270.1-P	Field mustard	nucleus	14.83	29.38
Bra010901.1-P	Field mustard	nucleus	21.45	29.06
Bra030094.1-P	Field mustard	nucleus	15.77	28.09
Bra018864.1-P	Field mustard	nucleus	17.98	28.08
Bra030957.1-P	Field mustard	nucleus	16.72	28.04
Bra030076.1-P	Field mustard	nucleus	21.14	27.8
Bra032898.1-P	Field mustard	nucleus	15.77	27.62
Bra036016.1-P	Field mustard	nucleus	16.72	27.46
Bra039658.1-P	Field mustard	nucleus	14.83	26.7
Bra001588.1-P	Field mustard	nucleus	17.67	26.54
Bra015266.1-P	Field mustard	nucleus	15.14	26.23
Bra003701.1-P	Field mustard	nucleus	16.09	26.15
Bra010881.1-P	Field mustard	nucleus	15.14	26.09
Bra001784.1-P	Field mustard	nucleus	17.67	26.05
Bra021594.1-P	Field mustard	nucleus	17.35	25.82
Bra038107.1-P	Field mustard	nucleus	15.77	25.0
Bra035792.1-P	Field mustard	mitochondrion, nucleus	17.35	24.44
Bra038261.1-P	Field mustard	nucleus	17.03	24.11
Bra006325.1-P	Field mustard	nucleus	14.83	23.98
Bra019801.1-P	Field mustard	nucleus	23.97	23.38
Bra012499.1-P	Field mustard	nucleus	21.45	23.05
Bra010972.1-P	Field mustard	nucleus	21.77	22.92
Bra026942.1-P	Field mustard	nucleus	21.14	22.79
Bra008793.1-P	Field mustard	nucleus	21.45	21.18
Bra023440.1-P	Field mustard	nucleus	22.4	21.07
Bra032881.1-P	Field mustard	nucleus	4.73	10.42

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	EnsemblPlantsGene:Bra002168	EnsemblPlants:Bra002168.1
EnsemblPlants:Bra002168.1-P	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	UniProt:M4CD87	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR31677	PANTHER:PTHR31677:SF40	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000254376D	SEG:seg

Description

AT5G18560 (E=1e-123) PUCHI | PUCHI; DNA binding / transcription factor

Coordinates

chrA10:+:11125052..11126005

Molecular Weight (calculated)

34843.2 Da

IEP (calculated)

6.507

GRAVY (calculated)

-0.583

Length

317 amino acids

Sequence
(BLAST)

001: MVFSVIHQNT TNTTTTTTAT TGERRGRRSK QAEPGRFLGV RRRPWGRYAA EIRDPTTKER HWLGTFDTAH EAALAYDRAA LSMRGTQGRT NFVYTPTDVH
101: TILTNPNLHS LIVSPYNNQS FLPNSSPQFV IDHLPHYQKY QQPKHTLPQA VSPVASFKTP VRHQNADTQA FGNSPQNSSS NGSLSSSLDE ESNFFSLEGT
201: NSSTNSGYLD CIVPHHCLKP PAETTTIQNQ TGAGFTTPAS KAFESPGGFS SSYFDDGDML MMNRHEFGSC DLSAMVSNYG AGASMSMEDY AIMEPQDFSS
301: PIAAFGDVTD TGFYSLY

Best Arabidopsis Sequence Match ( AT5G18560.1 )
(BLAST)

001: MSTSKTLDHN KPFETSQTQM GFALIHQNTS ANTTTTTTTG ERRGRRSKQA EPGRFLGVRR RPWGRYAAEI RDPTTKERHW LGTFDTAHEA ALAYDRAALS
101: MRGTQARTNF VYTPTDVHTI LTNPNLHSLI VSPYNNNQSF LPNSSPQFVI DHHPHYQNYH QPQQPKHTLP QTVLPAASFK TPVRHQSVDI QAFGNSPQNS
201: SSNGSLSSSL DEENNFFFSL TSEEHNKSNN NSGYLDCIVP NHCLKPPPEA TTTQNQAGAS FTTPVASKAS EPYGGFSNSY FEDGEMMMMN HHEFGSCDLS
301: AMITNYGAAA ASMSMEDYGM MEPQDLSSSS IAAFGDVVAD TTGFYSVF

Arabidopsis Description

ERF086PUCHI [Source:UniProtKB/TrEMBL;Acc:A0A178URC3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.