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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • mitochondrion 1
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra032394.1-P

Inferred from Arabidopsis experimental PPI

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY26605 Canola nucleus 98.64 98.64
CDY16048 Canola nucleus 96.26 96.92
Bra019801.1-P Field mustard nucleus 61.9 56.0
AT1G12980.1 Thale cress nucleus 55.78 50.0
Bra032900.1-P Field mustard nucleus 18.71 34.81
Bra032901.1-P Field mustard nucleus 18.37 33.33
Bra027270.1-P Field mustard nucleus 17.69 32.5
Bra030095.1-P Field mustard nucleus 18.37 32.14
Bra010880.1-P Field mustard nucleus 18.71 31.98
Bra030957.1-P Field mustard nucleus 20.07 31.22
Bra012499.1-P Field mustard nucleus 30.95 30.85
HORVU6Hr1G053460.1 Barley nucleus 18.37 30.51
Bra039658.1-P Field mustard nucleus 18.03 30.11
GSMUA_AchrUn_... Banana nucleus 27.89 29.29
Bra032898.1-P Field mustard nucleus 18.03 29.28
Bra015266.1-P Field mustard nucleus 18.03 28.96
Bra030094.1-P Field mustard nucleus 17.35 28.65
Bra010972.1-P Field mustard nucleus 29.25 28.57
Bra010881.1-P Field mustard nucleus 17.35 27.72
Bra003701.1-P Field mustard nucleus 18.37 27.69
Bra006222.1-P Field mustard nucleus 19.73 27.49
GSMUA_Achr9P01870_001 Banana nucleus 26.87 27.43
GSMUA_Achr3P19420_001 Banana nucleus 26.19 27.11
Bra036016.1-P Field mustard nucleus 17.69 26.94
Bra001588.1-P Field mustard nucleus 19.05 26.54
Bra021594.1-P Field mustard nucleus 19.05 26.29
Bra018864.1-P Field mustard nucleus 18.03 26.11
Bra026949.1-P Field mustard nucleus 19.39 25.79
Bra010901.1-P Field mustard nucleus 19.39 24.36
Bra001784.1-P Field mustard nucleus 17.69 24.19
Bra030076.1-P Field mustard nucleus 19.39 23.65
Bra035792.1-P Field mustard mitochondrion, nucleus 17.69 23.11
Bra038107.1-P Field mustard nucleus 15.65 23.0
Bra006325.1-P Field mustard nucleus 15.31 22.96
Bra038261.1-P Field mustard nucleus 17.01 22.32
Bra006466.1-P Field mustard nucleus, plastid 22.79 21.61
Zm00001d050948_P001 Maize nucleus 21.43 21.43
Bra023684.1-P Field mustard nucleus, plastid 22.79 21.41
Bra002168.1-P Field mustard nucleus, plastid 22.79 21.14
EES05354 Sorghum nucleus 21.43 20.32
TraesCS6D01G192200.1 Wheat nucleus 20.07 19.8
TraesCS6B01G237700.1 Wheat nucleus 20.07 19.8
TraesCS6A01G208700.1 Wheat nucleus 20.07 19.73
Os02t0594300-00 Rice nucleus 20.75 17.68
Bra008793.1-P Field mustard nucleus 18.71 17.13
Bra023440.1-P Field mustard nucleus 19.39 16.91
Bra032881.1-P Field mustard nucleus 2.38 4.86
Protein Annotations
MapMan:15.5.7.1Gene3D:3.30.730.10InterPro:AP2/ERF_domInterPro:AP2/ERF_dom_sfEnsemblPlantsGene:Bra026942EnsemblPlants:Bra026942.1
EnsemblPlants:Bra026942.1-PInterPro:DNA-bd_dom_sfGO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0003700
GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139
GO:GO:0006351GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987
InterPro:IPR001471InterPro:IPR036955UniProt:M4EDT2PFAM:PF00847PRINTS:PR00367PFscan:PS51032
PANTHER:PTHR31677PANTHER:PTHR31677:SF9SMART:SM00380SUPFAM:SSF54171UniParc:UPI0002542F7DSEG:seg
Description
AT1G12980 (E=1e-029) ESR1, DRN | ESR1 (ENHANCER OF SHOOT REGENERATION 1); DNA binding / protein binding / transcription factor
Coordinates
chrA09:-:34418185..34419069
Molecular Weight (calculated)
32667.0 Da
IEP (calculated)
7.922
GRAVY (calculated)
-0.686
Length
294 amino acids
Sequence
(BLAST)
001: MEEALRKFNE STYSFIPGYE PDPIPLTRIF ANDANSPQVN NTPSSKEAIV TITGSGRTRY RGVRRRPWGR YAAEIRDPTS KERRWLGTFD TAEQAACAYD
101: CAAREFRGSK ARTNYTYPVT NPVAEPRFSF SSKKSMKAVR SPIPSPLKMN TQPLLWYSSH ETATNGSSSP SCSLTKTASI SSSADENYTE FFPQEHSDSG
201: LLQDIVQEFL KKKRNQPPPL IPPPPPPPSP PMVGHLENFR EFSANSLFQP MVETSKLDCY GNISYQDGDS GFFYGMSSVA DGGFTYGSDA WGLS
Best Arabidopsis Sequence Match ( AT1G12980.1 )
(BLAST)
001: MEKALRNFTE STHSPDPNPL TKFFTEPTAS PVSRNRKLSS KDTTVTIAGA GSSTTRYRGV RRRPWGRYAA EIRDPMSKER RWLGTFDTAE QAACAYDSAA
101: RAFRGAKART NFTYPTAVIM PEPRFSFSNK KSSPSARCPL PSLPLDSSTQ NFYGAPAAQR IYNTQSIFLR DASCSSRKTT PYNNSFNGSS SSYSASKTAC
201: VSYSENENNE SFFPEESSDT GLLQEVVQEF LKKNRGVPPS PPTPPPVTSH HDNSGYFSNL TIYSENMVQE TKETLSSKLD RYGNFQANDD GVRAVADGGL
301: SLGSNEWGYQ EMLMYGTQLG CTCRRSWG
Arabidopsis Description
ESR1Ethylene-responsive transcription factor ESR1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAD4]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.