Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
locusB | locations |
---|---|
Bra032394.1-P |
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT1G12980.1 | Bra032394.1-P | AT1G30490.1 | 17376809 |
AT1G12980.1 | Bra032394.1-P | AT1G30490.1 | 18830673 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY26605 | Canola | nucleus | 98.64 | 98.64 |
CDY16048 | Canola | nucleus | 96.26 | 96.92 |
Bra019801.1-P | Field mustard | nucleus | 61.9 | 56.0 |
AT1G12980.1 | Thale cress | nucleus | 55.78 | 50.0 |
Bra032900.1-P | Field mustard | nucleus | 18.71 | 34.81 |
Bra032901.1-P | Field mustard | nucleus | 18.37 | 33.33 |
Bra027270.1-P | Field mustard | nucleus | 17.69 | 32.5 |
Bra030095.1-P | Field mustard | nucleus | 18.37 | 32.14 |
Bra010880.1-P | Field mustard | nucleus | 18.71 | 31.98 |
Bra030957.1-P | Field mustard | nucleus | 20.07 | 31.22 |
Bra012499.1-P | Field mustard | nucleus | 30.95 | 30.85 |
HORVU6Hr1G053460.1 | Barley | nucleus | 18.37 | 30.51 |
Bra039658.1-P | Field mustard | nucleus | 18.03 | 30.11 |
GSMUA_AchrUn_... | Banana | nucleus | 27.89 | 29.29 |
Bra032898.1-P | Field mustard | nucleus | 18.03 | 29.28 |
Bra015266.1-P | Field mustard | nucleus | 18.03 | 28.96 |
Bra030094.1-P | Field mustard | nucleus | 17.35 | 28.65 |
Bra010972.1-P | Field mustard | nucleus | 29.25 | 28.57 |
Bra010881.1-P | Field mustard | nucleus | 17.35 | 27.72 |
Bra003701.1-P | Field mustard | nucleus | 18.37 | 27.69 |
Bra006222.1-P | Field mustard | nucleus | 19.73 | 27.49 |
GSMUA_Achr9P01870_001 | Banana | nucleus | 26.87 | 27.43 |
GSMUA_Achr3P19420_001 | Banana | nucleus | 26.19 | 27.11 |
Bra036016.1-P | Field mustard | nucleus | 17.69 | 26.94 |
Bra001588.1-P | Field mustard | nucleus | 19.05 | 26.54 |
Bra021594.1-P | Field mustard | nucleus | 19.05 | 26.29 |
Bra018864.1-P | Field mustard | nucleus | 18.03 | 26.11 |
Bra026949.1-P | Field mustard | nucleus | 19.39 | 25.79 |
Bra010901.1-P | Field mustard | nucleus | 19.39 | 24.36 |
Bra001784.1-P | Field mustard | nucleus | 17.69 | 24.19 |
Bra030076.1-P | Field mustard | nucleus | 19.39 | 23.65 |
Bra035792.1-P | Field mustard | mitochondrion, nucleus | 17.69 | 23.11 |
Bra038107.1-P | Field mustard | nucleus | 15.65 | 23.0 |
Bra006325.1-P | Field mustard | nucleus | 15.31 | 22.96 |
Bra038261.1-P | Field mustard | nucleus | 17.01 | 22.32 |
Bra006466.1-P | Field mustard | nucleus, plastid | 22.79 | 21.61 |
Zm00001d050948_P001 | Maize | nucleus | 21.43 | 21.43 |
Bra023684.1-P | Field mustard | nucleus, plastid | 22.79 | 21.41 |
Bra002168.1-P | Field mustard | nucleus, plastid | 22.79 | 21.14 |
EES05354 | Sorghum | nucleus | 21.43 | 20.32 |
TraesCS6D01G192200.1 | Wheat | nucleus | 20.07 | 19.8 |
TraesCS6B01G237700.1 | Wheat | nucleus | 20.07 | 19.8 |
TraesCS6A01G208700.1 | Wheat | nucleus | 20.07 | 19.73 |
Os02t0594300-00 | Rice | nucleus | 20.75 | 17.68 |
Bra008793.1-P | Field mustard | nucleus | 18.71 | 17.13 |
Bra023440.1-P | Field mustard | nucleus | 19.39 | 16.91 |
Bra032881.1-P | Field mustard | nucleus | 2.38 | 4.86 |
Protein Annotations
MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | EnsemblPlantsGene:Bra026942 | EnsemblPlants:Bra026942.1 |
EnsemblPlants:Bra026942.1-P | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
InterPro:IPR001471 | InterPro:IPR036955 | UniProt:M4EDT2 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 |
PANTHER:PTHR31677 | PANTHER:PTHR31677:SF9 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI0002542F7D | SEG:seg |
Description
AT1G12980 (E=1e-029) ESR1, DRN | ESR1 (ENHANCER OF SHOOT REGENERATION 1); DNA binding / protein binding / transcription factor
Coordinates
chrA09:-:34418185..34419069
Molecular Weight (calculated)
32667.0 Da
IEP (calculated)
7.922
GRAVY (calculated)
-0.686
Length
294 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEALRKFNE STYSFIPGYE PDPIPLTRIF ANDANSPQVN NTPSSKEAIV TITGSGRTRY RGVRRRPWGR YAAEIRDPTS KERRWLGTFD TAEQAACAYD
101: CAAREFRGSK ARTNYTYPVT NPVAEPRFSF SSKKSMKAVR SPIPSPLKMN TQPLLWYSSH ETATNGSSSP SCSLTKTASI SSSADENYTE FFPQEHSDSG
201: LLQDIVQEFL KKKRNQPPPL IPPPPPPPSP PMVGHLENFR EFSANSLFQP MVETSKLDCY GNISYQDGDS GFFYGMSSVA DGGFTYGSDA WGLS
101: CAAREFRGSK ARTNYTYPVT NPVAEPRFSF SSKKSMKAVR SPIPSPLKMN TQPLLWYSSH ETATNGSSSP SCSLTKTASI SSSADENYTE FFPQEHSDSG
201: LLQDIVQEFL KKKRNQPPPL IPPPPPPPSP PMVGHLENFR EFSANSLFQP MVETSKLDCY GNISYQDGDS GFFYGMSSVA DGGFTYGSDA WGLS
001: MEKALRNFTE STHSPDPNPL TKFFTEPTAS PVSRNRKLSS KDTTVTIAGA GSSTTRYRGV RRRPWGRYAA EIRDPMSKER RWLGTFDTAE QAACAYDSAA
101: RAFRGAKART NFTYPTAVIM PEPRFSFSNK KSSPSARCPL PSLPLDSSTQ NFYGAPAAQR IYNTQSIFLR DASCSSRKTT PYNNSFNGSS SSYSASKTAC
201: VSYSENENNE SFFPEESSDT GLLQEVVQEF LKKNRGVPPS PPTPPPVTSH HDNSGYFSNL TIYSENMVQE TKETLSSKLD RYGNFQANDD GVRAVADGGL
301: SLGSNEWGYQ EMLMYGTQLG CTCRRSWG
101: RAFRGAKART NFTYPTAVIM PEPRFSFSNK KSSPSARCPL PSLPLDSSTQ NFYGAPAAQR IYNTQSIFLR DASCSSRKTT PYNNSFNGSS SSYSASKTAC
201: VSYSENENNE SFFPEESSDT GLLQEVVQEF LKKNRGVPPS PPTPPPVTSH HDNSGYFSNL TIYSENMVQE TKETLSSKLD RYGNFQANDD GVRAVADGGL
301: SLGSNEWGYQ EMLMYGTQLG CTCRRSWG
Arabidopsis Description
ESR1Ethylene-responsive transcription factor ESR1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAD4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.