Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G12980.1 | CDY02297 | AT1G30490.1 | 17376809 |
| AT1G12980.1 | CDY09572 | AT1G30490.1 | 17376809 |
| AT1G12980.1 | CDY02297 | AT1G30490.1 | 18830673 |
| AT1G12980.1 | CDY09572 | AT1G30490.1 | 18830673 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026942.1-P | Field mustard | nucleus | 96.92 | 96.26 |
| CDY26605 | Canola | nucleus | 96.23 | 95.58 |
| CDY19407 | Canola | nucleus | 64.04 | 59.18 |
| CDX98022 | Canola | nucleus | 34.59 | 51.01 |
| AT1G12980.1 | Thale cress | nucleus | 56.16 | 50.0 |
| CDY25733 | Canola | nucleus | 17.12 | 36.23 |
| CDY34105 | Canola | nucleus | 18.15 | 33.54 |
| CDY70796 | Canola | nucleus | 18.49 | 33.54 |
| CDY34104 | Canola | nucleus | 18.49 | 33.33 |
| CDY02523 | Canola | nucleus | 19.18 | 32.94 |
| CDY70175 | Canola | nucleus | 18.49 | 32.14 |
| CDY15673 | Canola | nucleus | 18.49 | 32.14 |
| CDX90146 | Canola | nucleus | 18.84 | 31.98 |
| CDY51586 | Canola | nucleus | 31.85 | 31.53 |
| CDY69368 | Canola | nucleus | 18.49 | 31.4 |
| CDX94610 | Canola | nucleus | 17.81 | 31.33 |
| HORVU6Hr1G053460.1 | Barley | nucleus | 18.49 | 30.51 |
| CDY03876 | Canola | nucleus | 31.16 | 30.43 |
| CDY18185 | Canola | nucleus | 18.49 | 30.0 |
| CDX89866 | Canola | nucleus | 18.15 | 29.44 |
| CDY24422 | Canola | nucleus | 29.79 | 29.1 |
| CDY24111 | Canola | nucleus | 17.47 | 28.98 |
| GSMUA_AchrUn_... | Banana | nucleus | 27.74 | 28.93 |
| CDY36131 | Canola | nucleus | 29.45 | 28.76 |
| CDY34107 | Canola | nucleus | 17.81 | 28.73 |
| CDY15674 | Canola | nucleus | 17.47 | 28.65 |
| CDY61213 | Canola | nucleus | 17.47 | 28.65 |
| CDX97640 | Canola | nucleus | 18.49 | 28.57 |
| CDY30806 | Canola | nucleus | 17.81 | 28.42 |
| CDX98534 | Canola | nucleus | 18.84 | 28.06 |
| CDX78545 | Canola | nucleus | 20.21 | 27.83 |
| CDX70526 | Canola | nucleus | 19.86 | 27.36 |
| CDX90145 | Canola | nucleus | 17.12 | 27.17 |
| GSMUA_Achr3P19420_001 | Banana | nucleus | 26.37 | 27.11 |
| CDY35734 | Canola | nucleus | 17.12 | 27.03 |
| CDX96955 | Canola | nucleus | 17.81 | 26.94 |
| CDY14914 | Canola | nucleus | 17.81 | 26.94 |
| GSMUA_Achr9P01870_001 | Banana | nucleus | 26.37 | 26.74 |
| CDY61906 | Canola | cytosol | 12.33 | 26.67 |
| CDX82442 | Canola | nucleus | 18.49 | 26.47 |
| CDX75817 | Canola | nucleus | 18.49 | 26.47 |
| CDY20105 | Canola | nucleus | 18.49 | 25.84 |
| CDY22810 | Canola | nucleus | 17.81 | 25.62 |
| CDY37113 | Canola | mitochondrion, nucleus | 18.15 | 25.48 |
| CDY32314 | Canola | nucleus | 18.84 | 25.23 |
| CDY11748 | Canola | nucleus | 19.18 | 24.24 |
| CDX82253 | Canola | nucleus | 17.81 | 24.19 |
| CDY36045 | Canola | nucleus | 17.81 | 23.96 |
| CDX90126 | Canola | nucleus | 19.18 | 23.93 |
| CDY15690 | Canola | nucleus | 19.18 | 23.43 |
| CDY45936 | Canola | nucleus | 16.1 | 23.38 |
| CDX94591 | Canola | nucleus | 19.18 | 23.24 |
| CDY25874 | Canola | nucleus | 15.41 | 22.5 |
| Zm00001d050948_P001 | Maize | nucleus | 21.58 | 21.43 |
| CDY02618 | Canola | nucleus | 23.97 | 21.08 |
| CDY68296 | Canola | nucleus | 23.29 | 21.05 |
| CDX88931 | Canola | nucleus | 23.63 | 20.97 |
| CDY58106 | Canola | nucleus | 23.63 | 20.78 |
| EES05354 | Sorghum | nucleus | 21.58 | 20.32 |
| CDX70826 | Canola | nucleus | 22.95 | 20.24 |
| CDY13901 | Canola | nucleus | 23.29 | 20.24 |
| TraesCS6D01G192200.1 | Wheat | nucleus | 20.21 | 19.8 |
| TraesCS6B01G237700.1 | Wheat | nucleus | 20.21 | 19.8 |
| TraesCS6A01G208700.1 | Wheat | nucleus | 20.21 | 19.73 |
| CDY26598 | Canola | nucleus | 12.33 | 18.18 |
| Os02t0594300-00 | Rice | nucleus | 20.89 | 17.68 |
| CDY16037 | Canola | nucleus | 11.99 | 17.68 |
| CDY72607 | Canola | nucleus | 19.18 | 17.34 |
| CDX91091 | Canola | nucleus | 19.86 | 17.06 |
| CDX85621 | Canola | nucleus | 19.18 | 16.37 |
| CDY46294 | Canola | nucleus | 2.4 | 4.86 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | GO:A0A078FUL1 | UniProt:A0A078FUL1 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| EnsemblPlants:CDY16048 | ProteinID:CDY16048 | ProteinID:CDY16048.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00090445001 | InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 |
| PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31677 | PANTHER:PTHR31677:SF9 | SMART:SM00380 | SUPFAM:SSF54171 |
| UniParc:UPI0004EF2E72 | SEG:seg | : | : | : | : |
Description
BnaC08g40750DBnaC08g40750D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FUL1]
Coordinates
chrLK032060:+:331450..332328
Molecular Weight (calculated)
32556.8 Da
IEP (calculated)
8.714
GRAVY (calculated)
-0.717
Length
292 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEALRKFNE STHSFIPGYE PDPIPLTRIF ANDANSPQVN NTPSSKEAIV TITGSGRTRY RGVRRRPWGR YAAEIRDPTS KERRWLGTFD TAEQAACAYD
101: CAAREFRGSK ARTNYTYPVT NPVAEPRFSF SSKKSMKAVR SPIPSPQKMN TKSLLWYSSH ETATNDSSTS SFSLTKTASI SSSADENYTE FFPQEHSDSG
201: LLQDIVQEFL KKKRNQPPPL IPPPPPSPPM VGHLKNFREF SANSLFQPMV ETSKLDCYGN ISYQDGDSGF FYGMSSVADG GFTYGSDAWG LS
101: CAAREFRGSK ARTNYTYPVT NPVAEPRFSF SSKKSMKAVR SPIPSPQKMN TKSLLWYSSH ETATNDSSTS SFSLTKTASI SSSADENYTE FFPQEHSDSG
201: LLQDIVQEFL KKKRNQPPPL IPPPPPSPPM VGHLKNFREF SANSLFQPMV ETSKLDCYGN ISYQDGDSGF FYGMSSVADG GFTYGSDAWG LS
001: MEKALRNFTE STHSPDPNPL TKFFTEPTAS PVSRNRKLSS KDTTVTIAGA GSSTTRYRGV RRRPWGRYAA EIRDPMSKER RWLGTFDTAE QAACAYDSAA
101: RAFRGAKART NFTYPTAVIM PEPRFSFSNK KSSPSARCPL PSLPLDSSTQ NFYGAPAAQR IYNTQSIFLR DASCSSRKTT PYNNSFNGSS SSYSASKTAC
201: VSYSENENNE SFFPEESSDT GLLQEVVQEF LKKNRGVPPS PPTPPPVTSH HDNSGYFSNL TIYSENMVQE TKETLSSKLD RYGNFQANDD GVRAVADGGL
301: SLGSNEWGYQ EMLMYGTQLG CTCRRSWG
101: RAFRGAKART NFTYPTAVIM PEPRFSFSNK KSSPSARCPL PSLPLDSSTQ NFYGAPAAQR IYNTQSIFLR DASCSSRKTT PYNNSFNGSS SSYSASKTAC
201: VSYSENENNE SFFPEESSDT GLLQEVVQEF LKKNRGVPPS PPTPPPVTSH HDNSGYFSNL TIYSENMVQE TKETLSSKLD RYGNFQANDD GVRAVADGGL
301: SLGSNEWGYQ EMLMYGTQLG CTCRRSWG
Arabidopsis Description
ESR1Ethylene-responsive transcription factor ESR1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAD4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.