Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G15210.1 | CDX74753 | AT2G45640.1 | 16429262 |
| AT3G15210.1 | CDY18913 | AT2G45640.1 | 16429262 |
| AT3G15210.1 | CDY53883 | AT2G45640.1 | 16429262 |
| AT3G15210.1 | CDY60684 | AT2G45640.1 | 16429262 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY20105 | Canola | nucleus | 88.07 | 91.87 |
| Bra003701.1-P | Field mustard | nucleus | 77.06 | 86.15 |
| CDX97640 | Canola | nucleus | 68.81 | 79.37 |
| CDX75817 | Canola | nucleus | 73.85 | 78.92 |
| CDX98534 | Canola | nucleus | 70.64 | 78.57 |
| CDX82442 | Canola | nucleus | 72.94 | 77.94 |
| AT3G15210.1 | Thale cress | nucleus | 77.06 | 75.68 |
| CDY02523 | Canola | nucleus | 51.38 | 65.88 |
| CDY25733 | Canola | nucleus | 41.28 | 65.22 |
| CDY61213 | Canola | nucleus | 49.54 | 60.67 |
| CDY24111 | Canola | nucleus | 47.25 | 58.52 |
| KRH26242 | Soybean | nucleus | 33.95 | 57.36 |
| CDX90146 | Canola | nucleus | 39.45 | 50.0 |
| CDY15673 | Canola | nucleus | 38.53 | 50.0 |
| CDY70175 | Canola | nucleus | 38.53 | 50.0 |
| CDY69368 | Canola | nucleus | 38.99 | 49.42 |
| CDY70796 | Canola | nucleus | 33.49 | 45.34 |
| CDY45936 | Canola | nucleus | 41.74 | 45.27 |
| CDY25874 | Canola | nucleus | 40.83 | 44.5 |
| CDY34104 | Canola | nucleus | 33.03 | 44.44 |
| CDY34105 | Canola | nucleus | 32.11 | 44.3 |
| CDY61906 | Canola | cytosol | 24.31 | 39.26 |
| CDX96955 | Canola | nucleus | 33.95 | 38.34 |
| CDY14914 | Canola | nucleus | 33.95 | 38.34 |
| CDX89866 | Canola | nucleus | 31.65 | 38.33 |
| CDY18185 | Canola | nucleus | 31.65 | 38.33 |
| CDY34107 | Canola | nucleus | 31.19 | 37.57 |
| CDY30806 | Canola | nucleus | 31.19 | 37.16 |
| CDY15674 | Canola | nucleus | 30.28 | 37.08 |
| CDX90145 | Canola | nucleus | 31.19 | 36.96 |
| CDY35734 | Canola | nucleus | 30.73 | 36.22 |
| CDX94610 | Canola | nucleus | 27.52 | 36.14 |
| CDX82253 | Canola | nucleus | 35.32 | 35.81 |
| CDY36045 | Canola | nucleus | 35.32 | 35.48 |
| CDY22810 | Canola | nucleus | 33.03 | 35.47 |
| CDY37113 | Canola | mitochondrion, nucleus | 33.49 | 35.1 |
| CDX70526 | Canola | nucleus | 24.31 | 25.0 |
| CDX78545 | Canola | nucleus | 23.85 | 24.53 |
| CDY11748 | Canola | nucleus | 22.02 | 20.78 |
| CDX90126 | Canola | nucleus | 22.02 | 20.51 |
| CDX94591 | Canola | nucleus | 22.48 | 20.33 |
| CDY15690 | Canola | nucleus | 22.02 | 20.08 |
| CDY26605 | Canola | nucleus | 26.15 | 19.39 |
| CDY16048 | Canola | nucleus | 25.23 | 18.84 |
| CDY03876 | Canola | nucleus | 25.69 | 18.73 |
| CDY36131 | Canola | nucleus | 25.69 | 18.73 |
| CDY51586 | Canola | nucleus | 25.23 | 18.64 |
| CDY24422 | Canola | nucleus | 25.23 | 18.39 |
| CDY16037 | Canola | nucleus | 16.51 | 18.18 |
| CDY26598 | Canola | nucleus | 16.51 | 18.18 |
| CDY19407 | Canola | nucleus | 26.15 | 18.04 |
| CDY68296 | Canola | nucleus | 26.15 | 17.65 |
| CDY02618 | Canola | nucleus | 26.15 | 17.17 |
| CDY13901 | Canola | nucleus | 26.15 | 16.96 |
| CDY58106 | Canola | nucleus | 25.69 | 16.87 |
| CDY72607 | Canola | nucleus | 24.77 | 16.72 |
| CDX88931 | Canola | nucleus | 24.77 | 16.41 |
| CDX70826 | Canola | nucleus | 24.77 | 16.31 |
| CDX91091 | Canola | nucleus | 24.77 | 15.88 |
| CDX85621 | Canola | nucleus | 24.77 | 15.79 |
| CDX98022 | Canola | nucleus | 5.5 | 6.06 |
| CDY46294 | Canola | nucleus | 2.29 | 3.47 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | GO:A0A078H4I5 | UniProt:A0A078H4I5 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| EnsemblPlants:CDY32314 | ProteinID:CDY32314 | ProteinID:CDY32314.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00051811001 | InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 |
| PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31677 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI0004EE8AAC |
| SEG:seg | : | : | : | : | : |
Description
BnaC01g36330DBnaC01g36330D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H4I5]
Coordinates
chrLK032292:-:76994..77742
Molecular Weight (calculated)
23222.9 Da
IEP (calculated)
9.617
GRAVY (calculated)
-0.238
Length
218 amino acids
Sequence
(BLAST)
(BLAST)
001: MVKMGLKPDT VHSNAVEIRY RGVRKRPWGR YAAEIRDPGK KTRVWLGTFD TAEAAARAYD KAARVFRGAK AKSNFPNFLE LSENVSIGGG GGFERSPSQT
101: SALYCASPPA AVTPAAADIV LPQLELSLGG RGGACYQIPV ARPVYYLDLM GIGNGGRAAR PPMSLACRSP VMHVATKMAC GGQSDSDSSS VVDFDGGIEK
201: RARLLDLDLN LPPPLEQA
101: SALYCASPPA AVTPAAADIV LPQLELSLGG RGGACYQIPV ARPVYYLDLM GIGNGGRAAR PPMSLACRSP VMHVATKMAC GGQSDSDSSS VVDFDGGIEK
201: RARLLDLDLN LPPPLEQA
001: MPNITMGLKP DPVAPTNPTH HESNAAKEIR YRGVRKRPWG RYAAEIRDPV KKTRVWLGTF DTAQQAARAY DAAARDFRGV KAKTNFGVIV GSSPTQSSTV
101: VDSPTAARFI TPPHLELSLG GGGACRRKIP LVHPVYYYNM ATYPKMTTCG VQSESETSSV VDFEGGAGKI SPPLDLDLNL APPAE
101: VDSPTAARFI TPPHLELSLG GGGACRRKIP LVHPVYYYNM ATYPKMTTCG VQSESETSSV VDFEGGAGKI SPPLDLDLNL APPAE
Arabidopsis Description
ERF8Ethylene-responsive transcription factor 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAI5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.