Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra030076.1-P | Field mustard | nucleus | 97.1 | 97.1 |
| CDY15690 | Canola | nucleus | 95.85 | 96.65 |
| AT1G28160.1 | Thale cress | nucleus | 85.89 | 84.49 |
| CDX90126 | Canola | nucleus | 81.74 | 84.19 |
| CDY11748 | Canola | nucleus | 80.5 | 83.98 |
| CDY46294 | Canola | nucleus | 45.23 | 75.69 |
| CDX78545 | Canola | nucleus | 36.51 | 41.51 |
| CDX70526 | Canola | nucleus | 36.1 | 41.04 |
| GSMUA_Achr6P35320_001 | Banana | nucleus | 22.41 | 37.76 |
| KRG91757 | Soybean | mitochondrion, nucleus | 21.58 | 36.62 |
| PGSC0003DMT400056527 | Potato | nucleus | 23.65 | 35.62 |
| Solyc04g072300.1.1 | Tomato | mitochondrion, nucleus | 23.24 | 35.0 |
| CDY25733 | Canola | nucleus | 19.92 | 34.78 |
| KRH35019 | Soybean | nucleus, plastid | 22.41 | 34.39 |
| GSMUA_Achr7P17910_001 | Banana | nucleus | 22.82 | 33.95 |
| Os08t0173700-01 | Rice | nucleus | 23.65 | 32.57 |
| KXG24553 | Sorghum | nucleus | 22.82 | 31.98 |
| CDX90146 | Canola | nucleus | 22.41 | 31.4 |
| CDY69368 | Canola | nucleus | 22.41 | 31.4 |
| CDY70796 | Canola | nucleus | 20.75 | 31.06 |
| CDY70175 | Canola | nucleus | 21.58 | 30.95 |
| CDY34104 | Canola | nucleus | 20.75 | 30.86 |
| CDY15673 | Canola | nucleus | 21.16 | 30.36 |
| Zm00001d024436_P001 | Maize | nucleus | 23.24 | 30.11 |
| CDY34105 | Canola | nucleus | 19.5 | 29.75 |
| CDY02523 | Canola | nucleus | 20.75 | 29.41 |
| CDX94610 | Canola | nucleus | 19.92 | 28.92 |
| CDX89866 | Canola | nucleus | 21.16 | 28.33 |
| CDY15674 | Canola | nucleus | 20.75 | 28.09 |
| CDY18185 | Canola | nucleus | 20.75 | 27.78 |
| CDX90145 | Canola | nucleus | 20.75 | 27.17 |
| CDY34107 | Canola | nucleus | 20.33 | 27.07 |
| CDY35734 | Canola | nucleus | 20.75 | 27.03 |
| CDX97640 | Canola | nucleus | 21.16 | 26.98 |
| CDY30806 | Canola | nucleus | 20.33 | 26.78 |
| CDY24111 | Canola | nucleus | 19.5 | 26.7 |
| CDX98534 | Canola | nucleus | 21.58 | 26.53 |
| CDY14914 | Canola | nucleus | 21.16 | 26.42 |
| CDX96955 | Canola | nucleus | 20.75 | 25.91 |
| CDY61213 | Canola | nucleus | 19.09 | 25.84 |
| CDX82442 | Canola | nucleus | 21.58 | 25.49 |
| CDX75817 | Canola | nucleus | 21.58 | 25.49 |
| CDY72607 | Canola | nucleus | 34.02 | 25.39 |
| CDX91091 | Canola | nucleus | 35.68 | 25.29 |
| CDX85621 | Canola | nucleus | 35.27 | 24.85 |
| CDY45936 | Canola | nucleus | 20.33 | 24.38 |
| CDY22810 | Canola | nucleus | 20.33 | 24.14 |
| CDY37113 | Canola | mitochondrion, nucleus | 20.75 | 24.04 |
| CDY25874 | Canola | nucleus | 19.92 | 24.0 |
| CDY20105 | Canola | nucleus | 20.75 | 23.92 |
| CDX82253 | Canola | nucleus | 21.16 | 23.72 |
| CDY36045 | Canola | nucleus | 20.75 | 23.04 |
| CDY61906 | Canola | cytosol | 12.86 | 22.96 |
| CDY16037 | Canola | nucleus | 18.67 | 22.73 |
| CDY26598 | Canola | nucleus | 18.67 | 22.73 |
| CDY32314 | Canola | nucleus | 20.33 | 22.48 |
| CDY68296 | Canola | nucleus | 27.8 | 20.74 |
| CDY02618 | Canola | nucleus | 28.22 | 20.48 |
| CDY36131 | Canola | nucleus | 25.31 | 20.4 |
| CDY51586 | Canola | nucleus | 24.9 | 20.34 |
| CDY19407 | Canola | nucleus | 26.56 | 20.25 |
| CDY58106 | Canola | nucleus | 27.8 | 20.18 |
| CDY24422 | Canola | nucleus | 24.9 | 20.07 |
| CDY13901 | Canola | nucleus | 27.8 | 19.94 |
| CDX70826 | Canola | nucleus | 27.39 | 19.94 |
| CDY03876 | Canola | nucleus | 24.48 | 19.73 |
| CDX88931 | Canola | nucleus | 26.56 | 19.45 |
| CDY26605 | Canola | nucleus | 23.65 | 19.39 |
| CDY16048 | Canola | nucleus | 23.24 | 19.18 |
| CDX98022 | Canola | nucleus | 6.22 | 7.58 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | GO:A0A078DZK2 | InterPro:AP2/ERF-transcript_factor | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| EnsemblPlants:CDX94591 | ProteinID:CDX94591 | ProteinID:CDX94591.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00157875001 | InterPro:IPR001471 | InterPro:IPR036955 |
| PFAM:PF00847 | PIRSF:PIRSF038123 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31677 | PANTHER:PTHR31677:SF9 |
| SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI0004EE3F85 | SEG:seg | : | : |
Description
BnaC07g10670D
Coordinates
chrLK031883:+:17274..17999
Molecular Weight (calculated)
26986.5 Da
IEP (calculated)
4.949
GRAVY (calculated)
-0.854
Length
241 amino acids
Sequence
(BLAST)
(BLAST)
001: MDFNGNVNAG SSSISKKSHR QKQQQPQPQQ HTEEIKYVGV RRRPWGRYAA EIRNPTTKER HWLGTFDTAE EAALAYDRAA RSIRGLTART NFVYSDMPRG
101: SSVTSFISPD ESQRFISELF NPPSQLEAPH SSNNNNLYLS ANNQNQNSIE FAYSGWTHES ECGYQSMNTN DEHCNHELAP LPPSTCSGAE LTIPETDSYW
201: NLAHAGMDTF SFEIDGFVDQ NSLGESGTEG FGSSSSTFFY Q
101: SSVTSFISPD ESQRFISELF NPPSQLEAPH SSNNNNLYLS ANNQNQNSIE FAYSGWTHES ECGYQSMNTN DEHCNHELAP LPPSTCSGAE LTIPETDSYW
201: NLAHAGMDTF SFEIDGFVDQ NSLGESGTEG FGSSSSTFFY Q
001: MEFNGNLNAG SCSRSKKSHR QKQQQPQPQP QQHIEEIKYV GVRRRPWGRY AAEIRNPTTK ERYWLGTFDT AEEAALAYDR AARSIRGLTA RTNFVYSDMP
101: RGSSVTSFVS PDESQRFISE LFNPPSQLEA TNSNNNNNNN LYSSTNNQNQ NSIEFSYNGW PQEAECGYQS ITSNAEHCDH ELPPLPPSTC FGAELRIPET
201: DSYWNVAHAS IDTFAFELDG FVDQNSLGQS GTEGFNSLPS TFFYQ
101: RGSSVTSFVS PDESQRFISE LFNPPSQLEA TNSNNNNNNN LYSSTNNQNQ NSIEFSYNGW PQEAECGYQS ITSNAEHCDH ELPPLPPSTC FGAELRIPET
201: DSYWNVAHAS IDTFAFELDG FVDQNSLGQS GTEGFNSLPS TFFYQ
Arabidopsis Description
ERF087Ethylene-responsive transcription factor ERF087 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ90]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.