Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra010901.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDY11748 | Canola | nucleus | 93.59 | 94.81 |
| CDY15690 | Canola | nucleus | 83.76 | 82.01 |
| CDX94591 | Canola | nucleus | 84.19 | 81.74 |
| AT1G28160.1 | Thale cress | nucleus | 85.47 | 81.63 |
| CDY46294 | Canola | nucleus | 44.87 | 72.92 |
| CDX78545 | Canola | nucleus | 35.9 | 39.62 |
| CDX70526 | Canola | nucleus | 35.47 | 39.15 |
| GSMUA_Achr6P35320_001 | Banana | nucleus | 22.22 | 36.36 |
| KRG91757 | Soybean | mitochondrion, nucleus | 21.79 | 35.92 |
| Solyc04g072300.1.1 | Tomato | mitochondrion, nucleus | 23.5 | 34.38 |
| PGSC0003DMT400056527 | Potato | nucleus | 23.5 | 34.38 |
| CDY25733 | Canola | nucleus | 20.09 | 34.06 |
| KRH35019 | Soybean | nucleus, plastid | 22.22 | 33.12 |
| GSMUA_Achr7P17910_001 | Banana | nucleus | 22.65 | 32.72 |
| Os08t0173700-01 | Rice | nucleus | 23.5 | 31.43 |
| CDY70796 | Canola | nucleus | 21.37 | 31.06 |
| CDY70175 | Canola | nucleus | 22.22 | 30.95 |
| CDY34104 | Canola | nucleus | 21.37 | 30.86 |
| KXG24553 | Sorghum | nucleus | 22.65 | 30.81 |
| CDY15673 | Canola | nucleus | 21.79 | 30.36 |
| CDY69368 | Canola | nucleus | 22.22 | 30.23 |
| CDX90146 | Canola | nucleus | 22.22 | 30.23 |
| CDY34105 | Canola | nucleus | 20.09 | 29.75 |
| CDX94610 | Canola | nucleus | 20.51 | 28.92 |
| Zm00001d024436_P001 | Maize | nucleus | 22.65 | 28.49 |
| CDY02523 | Canola | nucleus | 20.51 | 28.24 |
| CDY15674 | Canola | nucleus | 20.94 | 27.53 |
| CDX89866 | Canola | nucleus | 20.94 | 27.22 |
| CDY18185 | Canola | nucleus | 20.51 | 26.67 |
| CDX90145 | Canola | nucleus | 20.94 | 26.63 |
| CDY34107 | Canola | nucleus | 20.51 | 26.52 |
| CDY35734 | Canola | nucleus | 20.94 | 26.49 |
| CDY14914 | Canola | nucleus | 21.79 | 26.42 |
| CDY30806 | Canola | nucleus | 20.51 | 26.23 |
| CDX97640 | Canola | nucleus | 20.94 | 25.93 |
| CDX96955 | Canola | nucleus | 21.37 | 25.91 |
| CDX98534 | Canola | nucleus | 21.37 | 25.51 |
| CDY61213 | Canola | nucleus | 19.23 | 25.28 |
| CDY72607 | Canola | nucleus | 34.62 | 25.08 |
| CDY24111 | Canola | nucleus | 18.8 | 25.0 |
| CDX91091 | Canola | nucleus | 35.9 | 24.71 |
| CDX75817 | Canola | nucleus | 21.37 | 24.51 |
| CDX82442 | Canola | nucleus | 21.37 | 24.51 |
| CDY45936 | Canola | nucleus | 20.94 | 24.38 |
| CDY25874 | Canola | nucleus | 20.51 | 24.0 |
| CDX85621 | Canola | nucleus | 35.04 | 23.98 |
| CDX82253 | Canola | nucleus | 21.37 | 23.26 |
| CDY22810 | Canola | nucleus | 20.09 | 23.15 |
| CDY37113 | Canola | mitochondrion, nucleus | 20.51 | 23.08 |
| CDY20105 | Canola | nucleus | 20.51 | 22.97 |
| CDY61906 | Canola | cytosol | 13.25 | 22.96 |
| CDY36045 | Canola | nucleus | 20.94 | 22.58 |
| CDY32314 | Canola | nucleus | 20.51 | 22.02 |
| CDY16037 | Canola | nucleus | 18.38 | 21.72 |
| CDY26598 | Canola | nucleus | 18.38 | 21.72 |
| CDY02618 | Canola | nucleus | 29.91 | 21.08 |
| CDY68296 | Canola | nucleus | 29.06 | 21.05 |
| CDY58106 | Canola | nucleus | 29.49 | 20.78 |
| CDY36131 | Canola | nucleus | 26.5 | 20.74 |
| CDY51586 | Canola | nucleus | 26.07 | 20.68 |
| CDY13901 | Canola | nucleus | 29.49 | 20.54 |
| CDY24422 | Canola | nucleus | 26.07 | 20.4 |
| CDX88931 | Canola | nucleus | 28.63 | 20.36 |
| CDY19407 | Canola | nucleus | 27.35 | 20.25 |
| CDX70826 | Canola | nucleus | 28.63 | 20.24 |
| CDY03876 | Canola | nucleus | 25.64 | 20.07 |
| CDY26605 | Canola | nucleus | 24.36 | 19.39 |
| CDY16048 | Canola | nucleus | 23.93 | 19.18 |
| CDX98022 | Canola | nucleus | 6.84 | 8.08 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | GO:A0A078DLH4 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | EnsemblPlants:CDX90126 |
| ProteinID:CDX90126 | ProteinID:CDX90126.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00150648001 | InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 |
| PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31677 | PANTHER:PTHR31677:SF9 | SMART:SM00380 | SUPFAM:SSF54171 |
| UniParc:UPI0002545878 | SEG:seg | : | : | : | : |
Description
BnaA08g18580D
Coordinates
chrLK031862:+:218000..218704
Molecular Weight (calculated)
26433.0 Da
IEP (calculated)
5.308
GRAVY (calculated)
-0.930
Length
234 amino acids
Sequence
(BLAST)
(BLAST)
001: MDFNGNSYAG SSSRSKKSHR QKQQQQQPQP QHNEDIKYVG VRRRPWGRYA AEIRNPTTKE RYWLGTFDTA EEAALAYDRA ARSIRGLTAR TNFVYSDMPR
101: GTSVTSFISP DESQRFISEL FNPSSQLEAT NNINNNNNNL NSSTNNGWPH ESECGYQCIN TNDEHCDHEL PPFPPSTCFG AELMIPETDS YWNVVHASMN
201: TFSFEPDGFV GQNSLGESGT KGFDCSSSTF FYQS
101: GTSVTSFISP DESQRFISEL FNPSSQLEAT NNINNNNNNL NSSTNNGWPH ESECGYQCIN TNDEHCDHEL PPFPPSTCFG AELMIPETDS YWNVVHASMN
201: TFSFEPDGFV GQNSLGESGT KGFDCSSSTF FYQS
001: MEFNGNLNAG SCSRSKKSHR QKQQQPQPQP QQHIEEIKYV GVRRRPWGRY AAEIRNPTTK ERYWLGTFDT AEEAALAYDR AARSIRGLTA RTNFVYSDMP
101: RGSSVTSFVS PDESQRFISE LFNPPSQLEA TNSNNNNNNN LYSSTNNQNQ NSIEFSYNGW PQEAECGYQS ITSNAEHCDH ELPPLPPSTC FGAELRIPET
201: DSYWNVAHAS IDTFAFELDG FVDQNSLGQS GTEGFNSLPS TFFYQ
101: RGSSVTSFVS PDESQRFISE LFNPPSQLEA TNSNNNNNNN LYSSTNNQNQ NSIEFSYNGW PQEAECGYQS ITSNAEHCDH ELPPLPPSTC FGAELRIPET
201: DSYWNVAHAS IDTFAFELDG FVDQNSLGQS GTEGFNSLPS TFFYQ
Arabidopsis Description
ERF087Ethylene-responsive transcription factor ERF087 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ90]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.