Factsheet for Bra010901.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90126	Canola	nucleus	100.0	100.0
CDY11748	Canola	nucleus	93.59	94.81
Bra030076.1-P	Field mustard	nucleus	84.62	82.16
AT1G28160.1	Thale cress	nucleus	85.47	81.63
Bra032881.1-P	Field mustard	nucleus	44.87	72.92
Bra006222.1-P	Field mustard	nucleus	35.9	39.81
GSMUA_Achr6P35320_001	Banana	nucleus	22.22	36.36
KRG91757	Soybean	mitochondrion, nucleus	21.79	35.92
PGSC0003DMT400056527	Potato	nucleus	23.5	34.38
Solyc04g072300.1.1	Tomato	mitochondrion, nucleus	23.5	34.38
KRH35019	Soybean	nucleus, plastid	22.22	33.12
GSMUA_Achr7P17910_001	Banana	nucleus	22.65	32.72
Bra032900.1-P	Field mustard	nucleus	21.37	31.65
Os08t0173700-01	Rice	nucleus	23.5	31.43
Bra032901.1-P	Field mustard	nucleus	21.37	30.86
KXG24553	Sorghum	nucleus	22.65	30.81
Bra030095.1-P	Field mustard	nucleus	21.79	30.36
Bra010880.1-P	Field mustard	nucleus	22.22	30.23
Bra027270.1-P	Field mustard	nucleus	20.51	30.0
Bra026949.1-P	Field mustard	nucleus	28.21	29.86
Zm00001d024436_P001	Maize	nucleus	22.65	28.49
Bra030094.1-P	Field mustard	nucleus	20.94	27.53
Bra015266.1-P	Field mustard	nucleus	20.94	26.78
Bra010881.1-P	Field mustard	nucleus	20.94	26.63
Bra032898.1-P	Field mustard	nucleus	20.51	26.52
Bra036016.1-P	Field mustard	nucleus	21.79	26.42
Bra030957.1-P	Field mustard	nucleus	20.94	25.93
Bra039658.1-P	Field mustard	nucleus	18.8	25.0
Bra008793.1-P	Field mustard	nucleus	34.19	24.92
Bra023440.1-P	Field mustard	nucleus	35.04	24.33
Bra038107.1-P	Field mustard	nucleus	20.51	24.0
Bra006325.1-P	Field mustard	nucleus	20.09	23.98
Bra001588.1-P	Field mustard	nucleus	21.37	23.7
Bra001784.1-P	Field mustard	nucleus	21.37	23.26
Bra018864.1-P	Field mustard	nucleus	20.09	23.15
Bra003701.1-P	Field mustard	nucleus	18.8	22.56
Bra021594.1-P	Field mustard	nucleus	20.51	22.54
Bra035792.1-P	Field mustard	mitochondrion, nucleus	21.37	22.22
Bra002168.1-P	Field mustard	nucleus, plastid	29.06	21.45
Bra038261.1-P	Field mustard	nucleus	20.51	21.43
Bra023684.1-P	Field mustard	nucleus, plastid	28.63	21.41
Bra006466.1-P	Field mustard	nucleus, plastid	28.21	21.29
Bra012499.1-P	Field mustard	nucleus	26.07	20.68
Bra010972.1-P	Field mustard	nucleus	26.5	20.6
Bra026942.1-P	Field mustard	nucleus	24.36	19.39
Bra019801.1-P	Field mustard	nucleus	26.07	18.77

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	EnsemblPlantsGene:Bra010901	EnsemblPlants:Bra010901.1
EnsemblPlants:Bra010901.1-P	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	UniProt:M4D348	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR31677	PANTHER:PTHR31677:SF9	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI0002545878	SEG:seg

Description

AT1G28160 (E=4e-041) | ethylene-responsive element-binding family protein

Coordinates

chrA08:-:17013110..17013814

Molecular Weight (calculated)

26433.0 Da

IEP (calculated)

5.308

GRAVY (calculated)

-0.930

Length

234 amino acids

Sequence
(BLAST)

001: MDFNGNSYAG SSSRSKKSHR QKQQQQQPQP QHNEDIKYVG VRRRPWGRYA AEIRNPTTKE RYWLGTFDTA EEAALAYDRA ARSIRGLTAR TNFVYSDMPR
101: GTSVTSFISP DESQRFISEL FNPSSQLEAT NNINNNNNNL NSSTNNGWPH ESECGYQCIN TNDEHCDHEL PPFPPSTCFG AELMIPETDS YWNVVHASMN
201: TFSFEPDGFV GQNSLGESGT KGFDCSSSTF FYQS

Best Arabidopsis Sequence Match ( AT1G28160.1 )
(BLAST)

001: MEFNGNLNAG SCSRSKKSHR QKQQQPQPQP QQHIEEIKYV GVRRRPWGRY AAEIRNPTTK ERYWLGTFDT AEEAALAYDR AARSIRGLTA RTNFVYSDMP
101: RGSSVTSFVS PDESQRFISE LFNPPSQLEA TNSNNNNNNN LYSSTNNQNQ NSIEFSYNGW PQEAECGYQS ITSNAEHCDH ELPPLPPSTC FGAELRIPET
201: DSYWNVAHAS IDTFAFELDG FVDQNSLGQS GTEGFNSLPS TFFYQ

Arabidopsis Description

ERF087Ethylene-responsive transcription factor ERF087 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ90]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.