Factsheet for Bra023684.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 5
nucleus 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY58106	Canola	nucleus	99.04	93.37
Bra006466.1-P	Field mustard	nucleus, plastid	85.3	86.13
Bra002168.1-P	Field mustard	nucleus, plastid	85.94	84.86
AT5G18560.1	Thale cress	nucleus	87.54	78.74
Solyc01g067540.1.1	Tomato	nucleus	33.87	33.02
TraesCS2D01G118200.1	Wheat	nucleus, plastid	30.35	32.2
TraesCS2A01G116900.1	Wheat	nucleus	30.35	31.77
Zm00001d007119_P001	Maize	nucleus	30.03	31.76
Bra006222.1-P	Field mustard	nucleus	21.41	31.75
Bra030095.1-P	Field mustard	nucleus	16.93	31.55
Zm00001d022488_P001	Maize	nucleus	31.31	31.11
GSMUA_Achr8P30180_001	Banana	nucleus	30.67	30.77
TraesCS2B01G136100.1	Wheat	nucleus	30.03	30.62
Os07t0669500-01	Rice	nucleus, plastid	30.99	30.5
Bra032900.1-P	Field mustard	nucleus	15.34	30.38
PGSC0003DMT400058356	Potato	nucleus	32.91	30.21
KXG36907	Sorghum	nucleus	31.31	29.97
Bra010880.1-P	Field mustard	nucleus	16.29	29.65
Bra032901.1-P	Field mustard	nucleus	15.34	29.63
Bra026949.1-P	Field mustard	nucleus	20.77	29.41
Bra027270.1-P	Field mustard	nucleus	14.7	28.75
Bra010901.1-P	Field mustard	nucleus	21.41	28.63
Bra018864.1-P	Field mustard	nucleus	17.57	27.09
Bra030076.1-P	Field mustard	nucleus	20.77	26.97
Bra030094.1-P	Field mustard	nucleus	15.34	26.97
Bra036016.1-P	Field mustard	nucleus	16.61	26.94
Bra001588.1-P	Field mustard	nucleus	17.89	26.54
Bra032898.1-P	Field mustard	nucleus	15.34	26.52
Bra030957.1-P	Field mustard	nucleus	15.97	26.45
Bra015266.1-P	Field mustard	nucleus	15.02	25.68
Bra003701.1-P	Field mustard	nucleus	15.97	25.64
Bra001784.1-P	Field mustard	nucleus	17.57	25.58
Bra021594.1-P	Field mustard	nucleus	17.25	25.35
Bra039658.1-P	Field mustard	nucleus	14.06	25.0
Bra010881.1-P	Field mustard	nucleus	14.7	25.0
Bra038107.1-P	Field mustard	nucleus	15.34	24.0
Bra035792.1-P	Field mustard	mitochondrion, nucleus	16.93	23.56
Bra006325.1-P	Field mustard	nucleus	14.7	23.47
Bra038261.1-P	Field mustard	nucleus	16.61	23.21
Bra026942.1-P	Field mustard	nucleus	21.41	22.79
Bra019801.1-P	Field mustard	nucleus	23.32	22.46
Bra010972.1-P	Field mustard	nucleus	21.41	22.26
Bra012499.1-P	Field mustard	nucleus	20.77	22.03
Bra008793.1-P	Field mustard	nucleus	21.41	20.87
Bra023440.1-P	Field mustard	nucleus	22.36	20.77
Bra032881.1-P	Field mustard	nucleus	4.79	10.42

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF-transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	EnsemblPlantsGene:Bra023684
EnsemblPlants:Bra023684.1	EnsemblPlants:Bra023684.1-P	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	UniProt:M4E4I1	PFAM:PF00847	PIRSF:PIRSF038123
PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31677	PANTHER:PTHR31677:SF40	SMART:SM00380	SUPFAM:SSF54171
UniParc:UPI0002543200	SEG:seg	:	:	:	:

Description

AT5G18560 (E=2e-129) PUCHI | PUCHI; DNA binding / transcription factor

Coordinates

chrA02:-:4519530..4520471

Molecular Weight (calculated)

34506.8 Da

IEP (calculated)

6.168

GRAVY (calculated)

-0.577

Length

313 amino acids

Sequence
(BLAST)

001: MGFALINQNT TNATTTTNGE RRGRRSKQAE PGRFLGVRRR PWGRYAAEIR DLTTKERHWL GTFDTAHEAA LAYDRAALSM RGTQGRTNFV YTPNDVHTIL
101: TNPNLHSLIV SPYNNQSLLP NSSPQFVIDH HPHYQNYHQP KLTLPQTVLP AGSFKTPVRH QNADVQAFGT SPQNSSSNGS LSSSLDEENN FFSLEGSNSS
201: NNSGYLDCIV PNHCLKPPPE TTTIQNQTGA GFTTPASKAS ESYEGFSNSY FQDVDMMMEF GSCDLSAMIT NYGVGTSMSM EDYAIMEQQN FSSSSIAAFG
301: DVVADTTGFY SLY

Best Arabidopsis Sequence Match ( AT5G18560.1 )
(BLAST)

001: MSTSKTLDHN KPFETSQTQM GFALIHQNTS ANTTTTTTTG ERRGRRSKQA EPGRFLGVRR RPWGRYAAEI RDPTTKERHW LGTFDTAHEA ALAYDRAALS
101: MRGTQARTNF VYTPTDVHTI LTNPNLHSLI VSPYNNNQSF LPNSSPQFVI DHHPHYQNYH QPQQPKHTLP QTVLPAASFK TPVRHQSVDI QAFGNSPQNS
201: SSNGSLSSSL DEENNFFFSL TSEEHNKSNN NSGYLDCIVP NHCLKPPPEA TTTQNQAGAS FTTPVASKAS EPYGGFSNSY FEDGEMMMMN HHEFGSCDLS
301: AMITNYGAAA ASMSMEDYGM MEPQDLSSSS IAAFGDVVAD TTGFYSVF

Arabidopsis Description

ERF086PUCHI [Source:UniProtKB/TrEMBL;Acc:A0A178URC3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.