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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • cytosol 2
  • plastid 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY46294 Canola nucleus 95.14 95.14
Bra030076.1-P Field mustard nucleus 77.08 46.06
Bra010901.1-P Field mustard nucleus 72.92 44.87
Bra006222.1-P Field mustard nucleus 20.83 14.22
Bra008793.1-P Field mustard nucleus 16.67 7.48
Bra023440.1-P Field mustard nucleus 17.36 7.42
GSMUA_Achr8P30180_001 Banana nucleus 14.58 6.73
Bra010880.1-P Field mustard nucleus 7.64 6.4
Bra032900.1-P Field mustard nucleus 6.94 6.33
Bra026949.1-P Field mustard nucleus 9.03 5.88
Bra032901.1-P Field mustard nucleus 6.25 5.56
Bra030095.1-P Field mustard nucleus 6.25 5.36
Bra023684.1-P Field mustard nucleus, plastid 10.42 4.79
Bra002168.1-P Field mustard nucleus, plastid 10.42 4.73
Bra036016.1-P Field mustard nucleus 6.25 4.66
Zm00001d022488_P001 Maize nucleus 9.72 4.44
Bra015266.1-P Field mustard nucleus 5.56 4.37
KXG36907 Sorghum nucleus 9.72 4.28
Bra006325.1-P Field mustard nucleus 5.56 4.08
TraesCS2D01G118200.1 Wheat nucleus, plastid 8.33 4.07
TraesCS2A01G116900.1 Wheat nucleus 8.33 4.01
Bra018864.1-P Field mustard nucleus 5.56 3.94
Bra030094.1-P Field mustard nucleus 4.86 3.93
Bra006466.1-P Field mustard nucleus, plastid 8.33 3.87
Bra010881.1-P Field mustard nucleus 4.86 3.8
Zm00001d007119_P001 Maize nucleus 7.64 3.72
KRH75649 Soybean nucleus 6.94 3.61
TraesCS2B01G136100.1 Wheat nucleus 7.64 3.58
Bra035792.1-P Field mustard mitochondrion, nucleus 5.56 3.56
Bra038107.1-P Field mustard nucleus 4.86 3.5
Os07t0669500-01 Rice nucleus, plastid 7.64 3.46
Bra039658.1-P Field mustard nucleus 4.17 3.41
Bra010972.1-P Field mustard nucleus 6.94 3.32
Bra032898.1-P Field mustard nucleus 4.17 3.31
Bra001784.1-P Field mustard nucleus 4.86 3.26
Bra030957.1-P Field mustard nucleus 4.17 3.17
Bra038261.1-P Field mustard nucleus 4.86 3.12
Bra001588.1-P Field mustard nucleus 4.17 2.84
Bra019801.1-P Field mustard nucleus 6.25 2.77
Bra012499.1-P Field mustard nucleus 5.56 2.71
Bra027270.1-P Field mustard nucleus 2.78 2.5
Bra026942.1-P Field mustard nucleus 4.86 2.38
Bra021594.1-P Field mustard nucleus 3.47 2.35
Bra003701.1-P Field mustard nucleus 2.08 1.54
Protein Annotations
EnsemblPlants:Bra032881.1EnsemblPlants:Bra032881.1-PEnsemblPlantsGene:Bra032881SEG:segUniParc:UPI0002542513UniProt:M4EVP8
MapMan:35.1:::::
Description
AT1G28160 (E=1e-053) | ethylene-responsive element-binding family protein
Coordinates
chrA09:-:12168755..12169189
Molecular Weight (calculated)
16381.0 Da
IEP (calculated)
3.611
GRAVY (calculated)
-0.813
Length
144 amino acids
Sequence
(BLAST)
001: MPRGSSVTSF ISPDESQRFI SELFNHSFQP EAPNNITTNN LYSSTNTENQ NSNEFSYNGW PHESECDYQS INTNDEHCDH ELPPLPPSTC FGAELTYPET
101: DSYWNVANTS MDYFFELDAF VDQNSLVESG TEGFDSSSTT FFYQ
Best Arabidopsis Sequence Match ( AT1G28160.1 )
(BLAST)
001: MEFNGNLNAG SCSRSKKSHR QKQQQPQPQP QQHIEEIKYV GVRRRPWGRY AAEIRNPTTK ERYWLGTFDT AEEAALAYDR AARSIRGLTA RTNFVYSDMP
101: RGSSVTSFVS PDESQRFISE LFNPPSQLEA TNSNNNNNNN LYSSTNNQNQ NSIEFSYNGW PQEAECGYQS ITSNAEHCDH ELPPLPPSTC FGAELRIPET
201: DSYWNVAHAS IDTFAFELDG FVDQNSLGQS GTEGFNSLPS TFFYQ
Arabidopsis Description
ERF087Ethylene-responsive transcription factor ERF087 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ90]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.