Factsheet for Bra038261.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra001784.1-P	Field mustard	nucleus	83.04	86.51
Bra035792.1-P	Field mustard	mitochondrion, nucleus	83.48	83.11
AT3G20310.1	Thale cress	nucleus	86.16	79.1
Bra018864.1-P	Field mustard	nucleus	66.07	72.91
KRH73797	Soybean	nucleus	56.25	56.76
KRH14334	Soybean	nucleus	56.25	56.76
PGSC0003DMT400001820	Potato	nucleus	47.32	54.64
Solyc07g049490.1.1	Tomato	nucleus	47.77	54.04
TraesCS6B01G199800.1	Wheat	nucleus	47.77	52.45
TraesCS6A01G171900.1	Wheat	nucleus	48.21	52.17
TraesCS6D01G161300.1	Wheat	nucleus	47.77	51.69
Zm00001d015639_P001	Maize	nucleus	46.88	49.76
Zm00001d053707_P001	Maize	nucleus	45.98	49.52
EES06418	Sorghum	nucleus	46.88	49.07
VIT_19s0090g01080.t01	Wine grape	nucleus	55.36	48.06
Zm00001d001907_P001	Maize	nucleus, plastid	37.05	47.16
Solyc12g005960.1.1	Tomato	nucleus	40.62	47.15
PGSC0003DMT400036071	Potato	nucleus	39.29	46.32
TraesCS2B01G572500.1	Wheat	nucleus	39.29	46.07
Zm00001d026563_P001	Maize	nucleus	36.61	46.07
Os04t0669200-01	Rice	nucleus	38.84	45.79
TraesCS2D01G543900.1	Wheat	nucleus	39.29	45.6
TraesCS2A01G542700.1	Wheat	nucleus	38.84	45.08
Bra032900.1-P	Field mustard	nucleus	31.25	44.3
OQU82539	Sorghum	nucleus, plastid	37.5	44.21
Os06t0691100-00	Rice	nucleus	36.61	43.62
TraesCS7B01G335700.1	Wheat	nucleus	37.05	42.78
HORVU7Hr1G099670.1	Barley	nucleus	36.16	42.63
TraesCS7A01G436400.1	Wheat	nucleus	37.05	42.56
Bra030095.1-P	Field mustard	nucleus	31.7	42.26
Bra032901.1-P	Field mustard	nucleus	30.36	41.98
Bra010880.1-P	Field mustard	nucleus	32.14	41.86
TraesCS7D01G426700.1	Wheat	nucleus	37.05	41.71
Bra027270.1-P	Field mustard	nucleus	29.46	41.25
EER88863	Sorghum	nucleus	35.71	41.03
Bra030957.1-P	Field mustard	nucleus	33.93	40.21
Zm00001d014565_P001	Maize	nucleus	34.38	39.9
Bra030094.1-P	Field mustard	nucleus	31.7	39.89
TraesCS6A01G131200.1	Wheat	nucleus	35.71	39.6
Zm00001d036536_P001	Maize	nucleus	34.82	39.59
Zm00001d053859_P001	Maize	nucleus	34.38	39.29
Bra032898.1-P	Field mustard	nucleus	31.7	39.23
TraesCS6D01G121100.1	Wheat	nucleus	35.71	39.22
TraesCS6B01G159600.1	Wheat	nucleus	35.27	38.92
Bra001588.1-P	Field mustard	nucleus	36.16	38.39
Bra015266.1-P	Field mustard	nucleus	30.8	37.7
Bra039658.1-P	Field mustard	nucleus	29.46	37.5
Bra010881.1-P	Field mustard	nucleus	30.8	37.5
Bra038107.1-P	Field mustard	nucleus	33.04	37.0
Bra021594.1-P	Field mustard	nucleus	33.93	35.68
Bra036016.1-P	Field mustard	nucleus	29.46	34.2
Bra003701.1-P	Field mustard	nucleus	28.12	32.31
Bra006325.1-P	Field mustard	nucleus	25.45	29.08
Bra026949.1-P	Field mustard	nucleus	22.77	23.08
Bra006222.1-P	Field mustard	nucleus	20.54	21.8
Bra010901.1-P	Field mustard	nucleus	21.43	20.51
Bra030076.1-P	Field mustard	nucleus	21.88	20.33
Bra010972.1-P	Field mustard	nucleus	23.66	17.61
Bra006466.1-P	Field mustard	nucleus, plastid	24.11	17.42
Bra012499.1-P	Field mustard	nucleus	22.77	17.29
Bra002168.1-P	Field mustard	nucleus, plastid	24.11	17.03
Bra026942.1-P	Field mustard	nucleus	22.32	17.01
Bra023684.1-P	Field mustard	nucleus, plastid	23.21	16.61
Bra019801.1-P	Field mustard	nucleus	23.66	16.31
Bra008793.1-P	Field mustard	nucleus	21.43	14.95
Bra023440.1-P	Field mustard	nucleus	21.43	14.24
Bra032881.1-P	Field mustard	nucleus	3.12	4.86

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	ProteinID:ABB51576	ProteinID:ABB51576.1	InterPro:AP2/ERF-transcript_factor	InterPro:AP2/ERF_dom
InterPro:AP2/ERF_dom_sf	EnsemblPlantsGene:Bra038261	EnsemblPlants:Bra038261.1	EnsemblPlants:Bra038261.1-P	InterPro:DNA-bd_dom_sf	EMBL:DQ247969
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955
UniProt:M4FAZ5	PFAM:PF00847	PIRSF:PIRSF038123	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31677
PANTHER:PTHR31677:SF17	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI00025448FA	SEG:seg	:

Description

AT1G50640 (E=2e-054) ERF3, ATERF3 | ERF3 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 3); DNA binding / protein binding / transcription factor/ transcription repressor

Coordinates

chrA01:+:21249643..21250317

Molecular Weight (calculated)

24507.6 Da

IEP (calculated)

9.722

GRAVY (calculated)

-0.741

Length

224 amino acids

Sequence
(BLAST)

001: MRKGRGSSAV PPALHGSVKE PRYRGVRKRP WGRFAAEIRD PLKKSRVWLG TFDSAVEAAR AYDAAARNLR GSKAKTNFPI DCSPSSPLQP LNYQNHHRNL
101: APNQNQMDPF MDHRLYGGGG GSFPEQQQVI SRPASSSLSS TVKSCSGPRA AAKATKRYHP RTPPVAPEDC HSDCDSSSSV IDDGDDIASS SSRRKAPFMF
201: DLNFPPLDGA DLFADDLHCT DLRL

Best Arabidopsis Sequence Match ( AT3G20310.1 )
(BLAST)

001: MRKGRGSSVV GPALPVTAGG SVKEPRYRGV RKRPWGRFAA EIRDPLKKSR VWLGTFDSAV DAARAYDTAA RNLRGPKAKT NFPIDCSPSS PLQPLTYLHN
101: QNLCSPPVIQ NQIDPFMDHR LYGGGNFQEQ QQQQIISRPA SSSMSSTVKS CSGPRPMEAA AASSSVAKPL HAIKRYPRTP PVAPEDCHSD CDSSSSVIDD
201: GDDIASSSSR RKTPFQFDLN FPPLDGVDLF AGGIDDLHCT DLRL

Arabidopsis Description

ERF7Ethylene-responsive transcription factor 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LDE4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.