Factsheet for Bra001784.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 3
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82253	Canola	nucleus	99.07	99.07
CDY36045	Canola	nucleus	94.42	93.55
Bra035792.1-P	Field mustard	mitochondrion, nucleus	88.84	84.89
Bra038261.1-P	Field mustard	nucleus	86.51	83.04
Bra018864.1-P	Field mustard	nucleus	69.3	73.4
KRH73797	Soybean	nucleus	59.07	57.21
KRH14334	Soybean	nucleus	58.14	56.31
PGSC0003DMT400001820	Potato	nucleus	50.7	56.19
Solyc07g049490.1.1	Tomato	nucleus	50.7	55.05
Zm00001d015639_P001	Maize	nucleus	50.23	51.18
TraesCS6B01G199800.1	Wheat	nucleus	47.91	50.49
Zm00001d053707_P001	Maize	nucleus	48.84	50.48
TraesCS6A01G171900.1	Wheat	nucleus	48.37	50.24
EES06418	Sorghum	nucleus	49.77	50.0
TraesCS6D01G161300.1	Wheat	nucleus	47.91	49.76
Zm00001d001907_P001	Maize	nucleus, plastid	40.0	48.86
Zm00001d026563_P001	Maize	nucleus	40.0	48.31
Solyc12g005960.1.1	Tomato	nucleus	42.79	47.67
VIT_19s0090g01080.t01	Wine grape	nucleus	56.28	46.9
PGSC0003DMT400036071	Potato	nucleus	41.4	46.84
Os04t0669200-01	Rice	nucleus	40.93	46.32
TraesCS2B01G572500.1	Wheat	nucleus	40.93	46.07
Os06t0691100-00	Rice	nucleus	40.0	45.74
TraesCS2D01G543900.1	Wheat	nucleus	40.93	45.6
OQU82539	Sorghum	nucleus, plastid	40.0	45.26
TraesCS2A01G542700.1	Wheat	nucleus	40.47	45.08
HORVU7Hr1G099670.1	Barley	nucleus	39.53	44.74
TraesCS7B01G335700.1	Wheat	nucleus	40.0	44.33
Bra032900.1-P	Field mustard	nucleus	32.56	44.3
TraesCS7A01G436400.1	Wheat	nucleus	40.0	44.1
TraesCS7D01G426700.1	Wheat	nucleus	40.0	43.22
Bra032901.1-P	Field mustard	nucleus	32.09	42.59
EER88863	Sorghum	nucleus	38.6	42.56
Bra030095.1-P	Field mustard	nucleus	33.02	42.26
Bra010880.1-P	Field mustard	nucleus	33.49	41.86
Zm00001d014565_P001	Maize	nucleus	37.21	41.45
Bra027270.1-P	Field mustard	nucleus	30.7	41.25
Zm00001d036536_P001	Maize	nucleus	37.67	41.12
TraesCS6A01G131200.1	Wheat	nucleus	37.67	40.1
TraesCS6D01G121100.1	Wheat	nucleus	37.67	39.71
Bra030957.1-P	Field mustard	nucleus	34.88	39.68
TraesCS6B01G159600.1	Wheat	nucleus	37.21	39.41
Bra030094.1-P	Field mustard	nucleus	32.56	39.33
Zm00001d053859_P001	Maize	nucleus	35.81	39.29
Bra032898.1-P	Field mustard	nucleus	32.09	38.12
Bra039658.1-P	Field mustard	nucleus	30.7	37.5
Bra001588.1-P	Field mustard	nucleus	36.74	37.44
Bra038107.1-P	Field mustard	nucleus	34.42	37.0
Bra010881.1-P	Field mustard	nucleus	31.63	36.96
Bra015266.1-P	Field mustard	nucleus	31.16	36.61
Bra021594.1-P	Field mustard	nucleus	35.35	35.68
Bra036016.1-P	Field mustard	nucleus	30.23	33.68
Bra003701.1-P	Field mustard	nucleus	29.77	32.82
Bra006325.1-P	Field mustard	nucleus	26.98	29.59
Bra026949.1-P	Field mustard	nucleus	23.72	23.08
Bra006222.1-P	Field mustard	nucleus	21.86	22.27
Bra010901.1-P	Field mustard	nucleus	23.26	21.37
Bra030076.1-P	Field mustard	nucleus	23.72	21.16
Bra010972.1-P	Field mustard	nucleus	26.51	18.94
Bra012499.1-P	Field mustard	nucleus	25.58	18.64
Bra006466.1-P	Field mustard	nucleus, plastid	26.05	18.06
Bra026942.1-P	Field mustard	nucleus	24.19	17.69
Bra002168.1-P	Field mustard	nucleus, plastid	26.05	17.67
Bra023684.1-P	Field mustard	nucleus, plastid	25.58	17.57
Bra019801.1-P	Field mustard	nucleus	24.19	16.0
Bra008793.1-P	Field mustard	nucleus	23.26	15.58
Bra023440.1-P	Field mustard	nucleus	22.79	14.54
Bra032881.1-P	Field mustard	nucleus	3.26	4.86

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	EnsemblPlantsGene:Bra001784	EnsemblPlants:Bra001784.1
EnsemblPlants:Bra001784.1-P	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	UniProt:M4CC54	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR31677	PANTHER:PTHR31677:SF17	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI00025405C3	SEG:seg

Description

AT1G50640 (E=1e-053) ERF3, ATERF3 | ERF3 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 3); DNA binding / protein binding / transcription factor/ transcription repressor

Coordinates

chrA03:-:18426921..18427568

Molecular Weight (calculated)

23503.6 Da

IEP (calculated)

9.288

GRAVY (calculated)

-0.637

Length

215 amino acids

Sequence
(BLAST)

001: MRKGRGSSAV PPALPGSVKE PRYRGVRKRP WGRFAAEIRD PLKKSRVWLG TFDSAEEAAR AYDAAARNLR GPKAKTNFQI DCSPSSPLQP LHHRNQIDPF
101: MDHRLYGGEQ EVVIISRPAS SSMSSTVKSC SGVRPASSSV AKAATKRYPR TPPVAPEDCR SDCDSSSSVV DDGDDIASSS SRRKPPFEFD LNFPTLDGVD
201: LFVGADDLHC TDLRL

Best Arabidopsis Sequence Match ( AT3G20310.1 )
(BLAST)

001: MRKGRGSSVV GPALPVTAGG SVKEPRYRGV RKRPWGRFAA EIRDPLKKSR VWLGTFDSAV DAARAYDTAA RNLRGPKAKT NFPIDCSPSS PLQPLTYLHN
101: QNLCSPPVIQ NQIDPFMDHR LYGGGNFQEQ QQQQIISRPA SSSMSSTVKS CSGPRPMEAA AASSSVAKPL HAIKRYPRTP PVAPEDCHSD CDSSSSVIDD
201: GDDIASSSSR RKTPFQFDLN FPPLDGVDLF AGGIDDLHCT DLRL

Arabidopsis Description

ERF7Ethylene-responsive transcription factor 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LDE4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.