Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_12s0059g01460.t01 | Wine grape | nucleus | 46.51 | 58.82 |
| CDY36045 | Canola | nucleus | 48.06 | 57.14 |
| CDX82253 | Canola | nucleus | 47.29 | 56.74 |
| Bra001784.1-P | Field mustard | nucleus | 46.9 | 56.28 |
| Bra038261.1-P | Field mustard | nucleus | 48.06 | 55.36 |
| KRH73797 | Soybean | nucleus | 47.29 | 54.95 |
| PGSC0003DMT400001820 | Potato | nucleus | 41.09 | 54.64 |
| KRH14334 | Soybean | nucleus | 46.9 | 54.5 |
| Bra035792.1-P | Field mustard | mitochondrion, nucleus | 47.29 | 54.22 |
| Solyc07g049490.1.1 | Tomato | nucleus | 40.7 | 53.03 |
| TraesCS6B01G199800.1 | Wheat | nucleus | 41.47 | 52.45 |
| Zm00001d053707_P001 | Maize | nucleus | 41.86 | 51.92 |
| TraesCS6D01G161300.1 | Wheat | nucleus | 41.47 | 51.69 |
| TraesCS6A01G171900.1 | Wheat | nucleus | 41.47 | 51.69 |
| AT3G20310.1 | Thale cress | nucleus | 48.45 | 51.23 |
| Zm00001d015639_P001 | Maize | nucleus | 41.47 | 50.71 |
| Zm00001d001907_P001 | Maize | nucleus, plastid | 34.11 | 50.0 |
| EES06418 | Sorghum | nucleus | 41.47 | 50.0 |
| Zm00001d026563_P001 | Maize | nucleus | 33.72 | 48.88 |
| PGSC0003DMT400036071 | Potato | nucleus | 34.5 | 46.84 |
| OQU82539 | Sorghum | nucleus, plastid | 34.5 | 46.84 |
| VIT_10s0003g00130.t01 | Wine grape | nucleus | 27.52 | 46.71 |
| Solyc12g005960.1.1 | Tomato | nucleus | 34.88 | 46.63 |
| TraesCS2B01G572500.1 | Wheat | nucleus | 34.5 | 46.6 |
| Os04t0669200-01 | Rice | nucleus | 33.72 | 45.79 |
| TraesCS2A01G542700.1 | Wheat | nucleus | 34.11 | 45.6 |
| TraesCS2D01G543900.1 | Wheat | nucleus | 34.11 | 45.6 |
| Os06t0691100-00 | Rice | nucleus | 32.95 | 45.21 |
| EER88863 | Sorghum | nucleus | 34.11 | 45.13 |
| TraesCS7B01G335700.1 | Wheat | nucleus | 32.95 | 43.81 |
| Zm00001d036536_P001 | Maize | nucleus | 33.33 | 43.65 |
| HORVU7Hr1G099670.1 | Barley | nucleus | 31.78 | 43.16 |
| TraesCS7A01G436400.1 | Wheat | nucleus | 32.56 | 43.08 |
| TraesCS7D01G426700.1 | Wheat | nucleus | 32.95 | 42.71 |
| VIT_14s0081g00520.t01 | Wine grape | nucleus | 28.29 | 42.69 |
| Zm00001d014565_P001 | Maize | nucleus | 31.78 | 42.49 |
| Zm00001d053859_P001 | Maize | nucleus | 32.17 | 42.35 |
| VIT_07s0141g00690.t01 | Wine grape | nucleus | 27.13 | 41.67 |
| TraesCS6D01G121100.1 | Wheat | nucleus | 32.56 | 41.18 |
| TraesCS6A01G131200.1 | Wheat | nucleus | 32.17 | 41.09 |
| TraesCS6B01G159600.1 | Wheat | nucleus | 32.17 | 40.89 |
| VIT_19s0014g02240.t01 | Wine grape | nucleus | 32.17 | 37.73 |
| VIT_12s0028g03270.t01 | Wine grape | nucleus | 27.91 | 34.12 |
| VIT_10s0003g00140.t01 | Wine grape | nucleus | 28.68 | 32.6 |
| VIT_14s0068g00860.t01 | Wine grape | nucleus | 20.54 | 20.38 |
| VIT_00s0291g00030.t01 | Wine grape | nucleus | 25.19 | 15.7 |
Protein Annotations
| EntrezGene:100264172 | wikigene:100264172 | MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| ProteinID:CCB50691 | ProteinID:CCB50691.1 | InterPro:DNA-bd_dom_sf | UniProt:F6HES9 | EMBL:FN595751 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 | EntrezGene:LOC100264172 |
| wikigene:LOC100264172 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31677 | PANTHER:PTHR31677:SF17 |
| SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI000210A133 | ArrayExpress:VIT_19s0090g01080 | EnsemblPlantsGene:VIT_19s0090g01080 | EnsemblPlants:VIT_19s0090g01080.t01 |
| unigene:Vvi.2178 | RefSeq:XP_002278022 | RefSeq:XP_002278022.1 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr19:+:7162172..7170741
Molecular Weight (calculated)
28121.0 Da
IEP (calculated)
10.076
GRAVY (calculated)
-0.564
Length
258 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGTLLYFKN DKFCYVISSK PSSPLSFLHH RTSNMRRGRA APTATLATSA AGGAGGSGFV KDMRYRGVRK RPWGRFAAEI RDPWKKTRVW LGTFDSPEEA
101: ARAYDAAART LRGPKAKTNF PAVSGAAVAV PAFDRNLNGQ FGDGHHNRVY RADQFQEQQI HAQRPTSSGM SSTVESFSGP RPAPANLPPA TLRRHPRSPP
201: LLPDDCHSDC DSSSSVIDNG DIAAATSVRK PLPFDLNVMP SDDDELIMGD LHSTALRL
101: ARAYDAAART LRGPKAKTNF PAVSGAAVAV PAFDRNLNGQ FGDGHHNRVY RADQFQEQQI HAQRPTSSGM SSTVESFSGP RPAPANLPPA TLRRHPRSPP
201: LLPDDCHSDC DSSSSVIDNG DIAAATSVRK PLPFDLNVMP SDDDELIMGD LHSTALRL
001: MRRGRGSSAV AGPTVVAAIN GSVKEIRFRG VRKRPWGRFA AEIRDPWKKA RVWLGTFDSA EEAARAYDSA ARNLRGPKAK TNFPIDSSSP PPPNLRFNQI
101: RNQNQNQVDP FMDHRLFTDH QQQFPIVNRP TSSSMSSTVE SFSGPRPTTM KPATTKRYPR TPPVVPEDCH SDCDSSSSVI DDDDDIASSS RRRNPPFQFD
201: LNFPPLDCVD LFNGADDLHC TDLRL
101: RNQNQNQVDP FMDHRLFTDH QQQFPIVNRP TSSSMSSTVE SFSGPRPTTM KPATTKRYPR TPPVVPEDCH SDCDSSSSVI DDDDDIASSS RRRNPPFQFD
201: LNFPPLDCVD LFNGADDLHC TDLRL
Arabidopsis Description
ERF3Uncharacterized protein At1g50640 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SV01]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.