Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400036071 | Potato | nucleus | 93.78 | 95.26 |
| Solyc07g049490.1.1 | Tomato | nucleus | 51.3 | 50.0 |
| KRG98699 | Soybean | nucleus | 48.19 | 43.87 |
| KRH46237 | Soybean | nucleus | 47.67 | 43.81 |
| Zm00001d001907_P001 | Maize | nucleus, plastid | 39.9 | 43.75 |
| CDY36045 | Canola | nucleus | 48.7 | 43.32 |
| CDX82253 | Canola | nucleus | 48.19 | 43.26 |
| TraesCS6B01G199800.1 | Wheat | nucleus | 45.6 | 43.14 |
| Solyc10g006130.1.1 | Tomato | mitochondrion, nucleus | 49.22 | 42.99 |
| Bra001784.1-P | Field mustard | nucleus | 47.67 | 42.79 |
| Zm00001d026563_P001 | Maize | nucleus | 39.38 | 42.7 |
| Os06t0691100-00 | Rice | nucleus | 41.45 | 42.55 |
| TraesCS6A01G171900.1 | Wheat | nucleus | 45.6 | 42.51 |
| TraesCS6D01G161300.1 | Wheat | nucleus | 45.6 | 42.51 |
| Zm00001d053707_P001 | Maize | nucleus | 45.6 | 42.31 |
| TraesCS2B01G572500.1 | Wheat | nucleus | 41.45 | 41.88 |
| Zm00001d015639_P001 | Maize | nucleus | 45.6 | 41.71 |
| EES06418 | Sorghum | nucleus | 46.11 | 41.59 |
| Os04t0669200-01 | Rice | nucleus | 40.93 | 41.58 |
| TraesCS2D01G543900.1 | Wheat | nucleus | 41.45 | 41.45 |
| Bra035792.1-P | Field mustard | mitochondrion, nucleus | 47.67 | 40.89 |
| TraesCS7B01G335700.1 | Wheat | nucleus | 40.93 | 40.72 |
| Bra038261.1-P | Field mustard | nucleus | 47.15 | 40.62 |
| HORVU7Hr1G099670.1 | Barley | nucleus | 39.9 | 40.53 |
| TraesCS2A01G542700.1 | Wheat | nucleus | 40.41 | 40.41 |
| Solyc02g077840.1.1 | Tomato | nucleus | 32.12 | 40.26 |
| TraesCS7A01G436400.1 | Wheat | nucleus | 40.41 | 40.0 |
| OQU82539 | Sorghum | nucleus, plastid | 39.38 | 40.0 |
| TraesCS7D01G426700.1 | Wheat | nucleus | 40.41 | 39.2 |
| EER88863 | Sorghum | nucleus | 39.38 | 38.97 |
| AT3G20310.1 | Thale cress | nucleus | 49.22 | 38.93 |
| Zm00001d036536_P001 | Maize | nucleus | 39.38 | 38.58 |
| Zm00001d014565_P001 | Maize | nucleus | 38.34 | 38.34 |
| Solyc07g064890.1.1 | Tomato | nucleus | 47.67 | 38.33 |
| TraesCS6A01G131200.1 | Wheat | nucleus | 39.38 | 37.62 |
| TraesCS6B01G159600.1 | Wheat | nucleus | 39.38 | 37.44 |
| TraesCS6D01G121100.1 | Wheat | nucleus | 39.38 | 37.25 |
| Zm00001d053859_P001 | Maize | nucleus | 37.82 | 37.24 |
| VIT_19s0090g01080.t01 | Wine grape | nucleus | 46.63 | 34.88 |
| Solyc10g009110.1.1 | Tomato | nucleus | 39.9 | 34.68 |
| Solyc07g053740.1.1 | Tomato | nucleus | 38.86 | 33.33 |
| Solyc03g006320.1.1 | Tomato | nucleus, plastid | 36.27 | 32.41 |
| Solyc04g072300.1.1 | Tomato | mitochondrion, nucleus | 22.28 | 26.88 |
| Solyc11g045680.1.1 | Tomato | nucleus, plastid | 23.83 | 15.81 |
| Solyc01g067540.1.1 | Tomato | nucleus | 25.39 | 15.26 |
| Solyc11g045690.1.1 | Tomato | nucleus, plastid | 23.32 | 14.9 |
| Solyc05g013540.1.1 | Tomato | nucleus | 29.53 | 14.77 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 | UniProt:K4DBD4 |
| PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31677 | PANTHER:PTHR31677:SF17 | SMART:SM00380 |
| SUPFAM:SSF54171 | EnsemblPlantsGene:Solyc12g005960.1 | EnsemblPlants:Solyc12g005960.1.1 | UniParc:UPI000276A624 | SEG:seg | : |
Description
No Description!
Coordinates
chr12:-:591366..591947
Molecular Weight (calculated)
21272.9 Da
IEP (calculated)
8.489
GRAVY (calculated)
-0.710
Length
193 amino acids
Sequence
(BLAST)
(BLAST)
001: MPRRKNPEIN GSRSVVFQQS VIEPPRYRGV RKRPWGRFSA EIRDPVKKAR KWLGTFDTAE GAARAYDTAA RSFHGAKAKT NFPVLPPYGE NQFENLQQSR
101: PASSSMSSTV ESSSDARALC KTMQPRIEIP RRIPMGEGHS DCDSSSSVVD GNCIGGGGGD DDQTSSFCKD PLPFDLNFPP PSDDFQIITP LCF
101: PASSSMSSTV ESSSDARALC KTMQPRIEIP RRIPMGEGHS DCDSSSSVVD GNCIGGGGGD DDQTSSFCKD PLPFDLNFPP PSDDFQIITP LCF
001: MAKMGLKPDP ATTNQTHNNA KEIRYRGVRK RPWGRYAAEI RDPGKKTRVW LGTFDTAEEA ARAYDTAARD FRGAKAKTNF PTFLELSDQK VPTGFARSPS
101: QSSTLDCASP PTLVVPSATA GNVPPQLELS LGGGGGGSCY QIPMSRPVYF LDLMGIGNVG RGQPPPVTSA FRSPVVHVAT KMACGAQSDS DSSSVVDFEG
201: GMEKRSQLLD LDLNLPPPSE QA
101: QSSTLDCASP PTLVVPSATA GNVPPQLELS LGGGGGGSCY QIPMSRPVYF LDLMGIGNVG RGQPPPVTSA FRSPVVHVAT KMACGAQSDS DSSSVVDFEG
201: GMEKRSQLLD LDLNLPPPSE QA
Arabidopsis Description
ERF4Ethylene-responsive transcription factor 4 [Source:UniProtKB/Swiss-Prot;Acc:O80340]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.