Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G436400.1 | Wheat | nucleus | 94.33 | 93.85 |
| TraesCS7D01G426700.1 | Wheat | nucleus | 95.88 | 93.47 |
| HORVU7Hr1G099670.1 | Barley | nucleus | 84.54 | 86.32 |
| Os06t0691100-00 | Rice | nucleus | 78.35 | 80.85 |
| EER88863 | Sorghum | nucleus | 75.26 | 74.87 |
| Zm00001d014565_P001 | Maize | nucleus | 70.1 | 70.47 |
| Zm00001d036536_P001 | Maize | nucleus | 71.13 | 70.05 |
| TraesCS6B01G159600.1 | Wheat | nucleus | 61.86 | 59.11 |
| PGSC0003DMT400001820 | Potato | nucleus | 42.78 | 42.78 |
| Solyc07g049490.1.1 | Tomato | nucleus | 43.3 | 42.42 |
| PGSC0003DMT400036071 | Potato | nucleus | 40.21 | 41.05 |
| Solyc12g005960.1.1 | Tomato | nucleus | 40.72 | 40.93 |
| CDX82253 | Canola | nucleus | 44.85 | 40.47 |
| TraesCS2B01G572500.1 | Wheat | nucleus | 39.69 | 40.31 |
| Bra001784.1-P | Field mustard | nucleus | 44.33 | 40.0 |
| TraesCS6B01G199800.1 | Wheat | nucleus | 41.75 | 39.71 |
| CDY36045 | Canola | nucleus | 44.33 | 39.63 |
| Bra035792.1-P | Field mustard | mitochondrion, nucleus | 43.81 | 37.78 |
| KRH73797 | Soybean | nucleus | 42.78 | 37.39 |
| Bra038261.1-P | Field mustard | nucleus | 42.78 | 37.05 |
| KRH14334 | Soybean | nucleus | 42.27 | 36.94 |
| AT3G20310.1 | Thale cress | nucleus | 44.85 | 35.66 |
| TraesCS2B01G448100.1 | Wheat | nucleus | 39.69 | 35.16 |
| TraesCS3B01G357600.1 | Wheat | nucleus | 30.93 | 34.48 |
| VIT_19s0090g01080.t01 | Wine grape | nucleus | 43.81 | 32.95 |
| TraesCS1B01G326500.1 | Wheat | nucleus | 30.41 | 32.07 |
| TraesCS3B01G357500.1 | Wheat | nucleus, plastid | 35.57 | 28.4 |
| TraesCS1B01G326600.1 | Wheat | nucleus | 34.02 | 27.5 |
| TraesCS2B01G305500.1 | Wheat | plastid | 30.41 | 22.52 |
| TraesCS6B01G237700.1 | Wheat | nucleus | 32.47 | 21.14 |
| TraesCS2B01G136100.1 | Wheat | nucleus | 26.8 | 16.94 |
Protein Annotations
| Gene3D:3.30.730.10 | MapMan:35.2 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 |
| PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31677 | PANTHER:PTHR31677:SF13 | SMART:SM00380 |
| SUPFAM:SSF54171 | EnsemblPlantsGene:TraesCS7B01G335700 | EnsemblPlants:TraesCS7B01G335700.1 | TIGR:cd00018 | SEG:seg | : |
Description
No Description!
Coordinates
chr7B:-:590842119..590842703
Molecular Weight (calculated)
20606.8 Da
IEP (calculated)
8.934
GRAVY (calculated)
-0.827
Length
194 amino acids
Sequence
(BLAST)
(BLAST)
001: MRKARPPQPQ PQPSQQSPEI RYRGVRKRPS GRYAAEIRDP AKKTPIWLGT FDCAEDAARA YDSAARSLRG PTARTNFPPS SATQPPPRPP PPAAAAAAAT
101: SSQSSTVESW SGGGPRAPAR ARSAARAGTA KEGEEDCRSY CGSSSSVLLE EGADDAAASR SPLPFDLNMP PPQEGALDAE ADQMTCRYDT LLRL
101: SSQSSTVESW SGGGPRAPAR ARSAARAGTA KEGEEDCRSY CGSSSSVLLE EGADDAAASR SPLPFDLNMP PPQEGALDAE ADQMTCRYDT LLRL
001: MRRGRGSSAV AGPTVVAAIN GSVKEIRFRG VRKRPWGRFA AEIRDPWKKA RVWLGTFDSA EEAARAYDSA ARNLRGPKAK TNFPIDSSSP PPPNLRFNQI
101: RNQNQNQVDP FMDHRLFTDH QQQFPIVNRP TSSSMSSTVE SFSGPRPTTM KPATTKRYPR TPPVVPEDCH SDCDSSSSVI DDDDDIASSS RRRNPPFQFD
201: LNFPPLDCVD LFNGADDLHC TDLRL
101: RNQNQNQVDP FMDHRLFTDH QQQFPIVNRP TSSSMSSTVE SFSGPRPTTM KPATTKRYPR TPPVVPEDCH SDCDSSSSVI DDDDDIASSS RRRNPPFQFD
201: LNFPPLDCVD LFNGADDLHC TDLRL
Arabidopsis Description
ERF3Uncharacterized protein At1g50640 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SV01]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.