Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400001820 | Potato | nucleus | 90.4 | 92.27 |
| KRG98699 | Soybean | nucleus | 56.57 | 52.83 |
| KRH46237 | Soybean | nucleus | 55.56 | 52.38 |
| Solyc12g005960.1.1 | Tomato | nucleus | 50.0 | 51.3 |
| CDX82253 | Canola | nucleus | 55.56 | 51.16 |
| Bra001784.1-P | Field mustard | nucleus | 55.05 | 50.7 |
| CDY36045 | Canola | nucleus | 55.56 | 50.69 |
| Zm00001d001907_P001 | Maize | nucleus, plastid | 43.43 | 48.86 |
| TraesCS6B01G199800.1 | Wheat | nucleus | 50.0 | 48.53 |
| Solyc10g006130.1.1 | Tomato | mitochondrion, nucleus | 54.04 | 48.42 |
| Zm00001d053707_P001 | Maize | nucleus | 50.51 | 48.08 |
| TraesCS6D01G161300.1 | Wheat | nucleus | 50.0 | 47.83 |
| TraesCS6A01G171900.1 | Wheat | nucleus | 50.0 | 47.83 |
| Bra038261.1-P | Field mustard | nucleus | 54.04 | 47.77 |
| Zm00001d026563_P001 | Maize | nucleus | 42.93 | 47.75 |
| Bra035792.1-P | Field mustard | mitochondrion, nucleus | 54.04 | 47.56 |
| Zm00001d015639_P001 | Maize | nucleus | 50.51 | 47.39 |
| Os04t0669200-01 | Rice | nucleus | 44.95 | 46.84 |
| EES06418 | Sorghum | nucleus | 50.0 | 46.26 |
| Solyc07g064890.1.1 | Tomato | nucleus | 55.56 | 45.83 |
| Os06t0691100-00 | Rice | nucleus | 42.93 | 45.21 |
| AT3G20310.1 | Thale cress | nucleus | 55.05 | 44.67 |
| TraesCS2B01G572500.1 | Wheat | nucleus | 42.93 | 44.5 |
| OQU82539 | Sorghum | nucleus, plastid | 42.42 | 44.21 |
| TraesCS2A01G542700.1 | Wheat | nucleus | 42.93 | 44.04 |
| TraesCS2D01G543900.1 | Wheat | nucleus | 42.93 | 44.04 |
| TraesCS7B01G335700.1 | Wheat | nucleus | 42.42 | 43.3 |
| HORVU7Hr1G099670.1 | Barley | nucleus | 41.41 | 43.16 |
| TraesCS7A01G436400.1 | Wheat | nucleus | 41.92 | 42.56 |
| Solyc02g077840.1.1 | Tomato | nucleus | 32.83 | 42.21 |
| TraesCS7D01G426700.1 | Wheat | nucleus | 41.92 | 41.71 |
| EER88863 | Sorghum | nucleus | 40.91 | 41.54 |
| Zm00001d036536_P001 | Maize | nucleus | 40.91 | 41.12 |
| Zm00001d014565_P001 | Maize | nucleus | 39.9 | 40.93 |
| VIT_19s0090g01080.t01 | Wine grape | nucleus | 53.03 | 40.7 |
| TraesCS6A01G131200.1 | Wheat | nucleus | 41.41 | 40.59 |
| TraesCS6B01G159600.1 | Wheat | nucleus | 41.41 | 40.39 |
| TraesCS6D01G121100.1 | Wheat | nucleus | 41.41 | 40.2 |
| Zm00001d053859_P001 | Maize | nucleus | 38.89 | 39.29 |
| Solyc10g009110.1.1 | Tomato | nucleus | 38.89 | 34.68 |
| Solyc07g053740.1.1 | Tomato | nucleus | 37.88 | 33.33 |
| Solyc03g006320.1.1 | Tomato | nucleus, plastid | 36.36 | 33.33 |
| Solyc04g072300.1.1 | Tomato | mitochondrion, nucleus | 21.21 | 26.25 |
| Solyc11g045680.1.1 | Tomato | nucleus, plastid | 25.76 | 17.53 |
| Solyc11g045690.1.1 | Tomato | nucleus, plastid | 24.75 | 16.23 |
| Solyc05g013540.1.1 | Tomato | nucleus | 31.31 | 16.06 |
| Solyc01g067540.1.1 | Tomato | nucleus | 24.75 | 15.26 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | ncoils:Coil | InterPro:DNA-bd_dom_sf |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 |
| UniProt:K4CF52 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31677 | PANTHER:PTHR31677:SF17 |
| SMART:SM00380 | SUPFAM:SSF54171 | EnsemblPlantsGene:Solyc07g049490.1 | EnsemblPlants:Solyc07g049490.1.1 | UniParc:UPI0001D64C44 | SEG:seg |
Description
No Description!
Coordinates
chr7:+:59764501..59765097
Molecular Weight (calculated)
22042.7 Da
IEP (calculated)
5.871
GRAVY (calculated)
-0.827
Length
198 amino acids
Sequence
(BLAST)
(BLAST)
001: MRHRKSSELK RPGSDLLQQP DADPPRYRGV RKRPWGRFAA EIRDPIKKTR VWLGTFDTAE DAARAYDDAA RALRGAKAKT NFNMLPLTDD PYDDEFELFP
101: NPRPASSSMS STLESSSGPR GGSSSKVTRM KIPRPVRPME ECRSDCDSSS SVVDDRCDVD QTSSFVTKQP LPFDLNLPPP SDNDGVDVDD LHVTALCL
101: NPRPASSSMS STLESSSGPR GGSSSKVTRM KIPRPVRPME ECRSDCDSSS SVVDDRCDVD QTSSFVTKQP LPFDLNLPPP SDNDGVDVDD LHVTALCL
001: MRKGRGSSVV GPALPVTAGG SVKEPRYRGV RKRPWGRFAA EIRDPLKKSR VWLGTFDSAV DAARAYDTAA RNLRGPKAKT NFPIDCSPSS PLQPLTYLHN
101: QNLCSPPVIQ NQIDPFMDHR LYGGGNFQEQ QQQQIISRPA SSSMSSTVKS CSGPRPMEAA AASSSVAKPL HAIKRYPRTP PVAPEDCHSD CDSSSSVIDD
201: GDDIASSSSR RKTPFQFDLN FPPLDGVDLF AGGIDDLHCT DLRL
101: QNLCSPPVIQ NQIDPFMDHR LYGGGNFQEQ QQQQIISRPA SSSMSSTVKS CSGPRPMEAA AASSSVAKPL HAIKRYPRTP PVAPEDCHSD CDSSSSVIDD
201: GDDIASSSSR RKTPFQFDLN FPPLDGVDLF AGGIDDLHCT DLRL
Arabidopsis Description
ERF7Ethylene-responsive transcription factor 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LDE4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.