Factsheet for Solyc01g067540.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400058356	Potato	nucleus	88.47	83.28
KRH50906	Soybean	nucleus	44.55	41.33
KRH02219	Soybean	nucleus	44.24	40.11
KRH75649	Soybean	nucleus	31.15	36.1
CDY02618	Canola	nucleus	35.83	34.64
Solyc04g072300.1.1	Tomato	mitochondrion, nucleus	17.13	34.38
Bra006466.1-P	Field mustard	nucleus, plastid	33.02	34.19
CDX88931	Canola	nucleus	34.89	34.04
CDY58106	Canola	nucleus	35.2	34.04
Bra023684.1-P	Field mustard	nucleus, plastid	33.02	33.87
CDX70826	Canola	nucleus	34.27	33.23
AT5G18560.1	Thale cress	nucleus	35.83	33.05
Bra002168.1-P	Field mustard	nucleus, plastid	32.4	32.81
TraesCS2A01G116900.1	Wheat	nucleus	30.53	32.78
CDY13901	Canola	nucleus	33.96	32.44
TraesCS2D01G118200.1	Wheat	nucleus, plastid	29.59	32.2
GSMUA_Achr8P30180_001	Banana	nucleus	31.15	32.05
TraesCS2B01G136100.1	Wheat	nucleus	30.53	31.92
CDY68296	Canola	nucleus	32.09	31.89
Zm00001d007119_P001	Maize	nucleus	29.28	31.76
Os07t0669500-01	Rice	nucleus, plastid	30.22	30.5
Zm00001d022488_P001	Maize	nucleus	28.97	29.52
Solyc02g077840.1.1	Tomato	nucleus	14.02	29.22
KXG36907	Sorghum	nucleus	29.28	28.75
Solyc12g005960.1.1	Tomato	nucleus	15.26	25.39
Solyc07g049490.1.1	Tomato	nucleus	15.26	24.75
Solyc07g053740.1.1	Tomato	nucleus	16.82	24.0
Solyc10g009110.1.1	Tomato	nucleus	15.58	22.52
Solyc11g045680.1.1	Tomato	nucleus, plastid	20.25	22.34
Solyc03g006320.1.1	Tomato	nucleus, plastid	14.95	22.22
Solyc10g006130.1.1	Tomato	mitochondrion, nucleus	15.26	22.17
Solyc11g045690.1.1	Tomato	nucleus, plastid	20.25	21.52
Solyc07g064890.1.1	Tomato	nucleus	15.58	20.83
Solyc05g013540.1.1	Tomato	nucleus	21.5	17.88

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	GO:GO:0000003
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009653	GO:GO:0009791
GO:GO:0009908	GO:GO:0009987	GO:GO:0010102	GO:GO:0010432	GO:GO:0010451	GO:GO:0010582
GO:GO:0040007	GO:GO:0043565	GO:GO:0044212	InterPro:IPR001471	InterPro:IPR036955	UniProt:K4AX02
PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31677	PANTHER:PTHR31677:SF40	SMART:SM00380
SUPFAM:SSF54171	EnsemblPlantsGene:Solyc01g067540.1	EnsemblPlants:Solyc01g067540.1.1	UniParc:UPI0002762F7A	SEG:seg	:

Description

Ethylene-responsive transcription factor ERF086 [Source:Projected from Arabidopsis thaliana (AT5G18560) UniProtKB/Swiss-Prot;Acc:Q6J9Q2]

Coordinates

chr1:+:76297173..76298138

Molecular Weight (calculated)

36164.4 Da

IEP (calculated)

4.992

GRAVY (calculated)

-0.880

Length

321 amino acids

Sequence
(BLAST)

001: MSSSNSTPIS SDNQLPFGMF EPIRTPTGYS WLQRNTALCQ PSEKRGRRKQ TEPGRFLGVR RRPWGRYAAE IRDPTTKERH WLGTFDTAQE AALAYDRAAL
101: SMKGTQARTN FIYTSDSANT NFPSLISPFE HVQNMLNPNN THFNFNTHIN KNTKTKTTTT TNSDESSSYG SSPNENNSFV FLNDDMNNNN NNNTNSGYLL
201: DCIVPDSCLK PPPQQPQEPS STPQSKMNGE IENTYYDTNG FFDMSSSWES SCELSAMTMN HSSNNMNHQM MDDVADGSYY YPNMEINNYD HLMMMPNHET
301: TNAAAAAAAF GDVEFGYTTL F

Best Arabidopsis Sequence Match ( AT5G18560.1 )
(BLAST)

001: MSTSKTLDHN KPFETSQTQM GFALIHQNTS ANTTTTTTTG ERRGRRSKQA EPGRFLGVRR RPWGRYAAEI RDPTTKERHW LGTFDTAHEA ALAYDRAALS
101: MRGTQARTNF VYTPTDVHTI LTNPNLHSLI VSPYNNNQSF LPNSSPQFVI DHHPHYQNYH QPQQPKHTLP QTVLPAASFK TPVRHQSVDI QAFGNSPQNS
201: SSNGSLSSSL DEENNFFFSL TSEEHNKSNN NSGYLDCIVP NHCLKPPPEA TTTQNQAGAS FTTPVASKAS EPYGGFSNSY FEDGEMMMMN HHEFGSCDLS
301: AMITNYGAAA ASMSMEDYGM MEPQDLSSSS IAAFGDVVAD TTGFYSVF

Arabidopsis Description

ERF086PUCHI [Source:UniProtKB/TrEMBL;Acc:A0A178URC3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.