Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY58106 | Canola | nucleus | 96.08 | 96.08 |
| CDX88931 | Canola | nucleus | 84.94 | 85.71 |
| CDY13901 | Canola | nucleus | 86.14 | 85.12 |
| AT5G18560.1 | Thale cress | nucleus | 88.25 | 84.2 |
| CDX70826 | Canola | nucleus | 83.73 | 83.99 |
| CDY68296 | Canola | nucleus | 81.63 | 83.9 |
| Solyc01g067540.1.1 | Tomato | nucleus | 34.64 | 35.83 |
| CDX78545 | Canola | nucleus | 22.29 | 34.91 |
| CDX70526 | Canola | nucleus | 21.99 | 34.43 |
| CDY25733 | Canola | nucleus | 14.16 | 34.06 |
| TraesCS2A01G116900.1 | Wheat | nucleus | 30.12 | 33.44 |
| CDY70175 | Canola | nucleus | 16.87 | 33.33 |
| CDY70796 | Canola | nucleus | 15.96 | 32.92 |
| TraesCS2D01G118200.1 | Wheat | nucleus, plastid | 29.22 | 32.88 |
| PGSC0003DMT400058356 | Potato | nucleus | 33.73 | 32.84 |
| Zm00001d007119_P001 | Maize | nucleus | 29.22 | 32.77 |
| CDY15673 | Canola | nucleus | 16.57 | 32.74 |
| Zm00001d022488_P001 | Maize | nucleus | 30.72 | 32.38 |
| TraesCS2B01G136100.1 | Wheat | nucleus | 29.82 | 32.25 |
| CDY34104 | Canola | nucleus | 15.66 | 32.1 |
| Os07t0669500-01 | Rice | nucleus, plastid | 30.72 | 32.08 |
| GSMUA_Achr8P30180_001 | Banana | nucleus | 29.82 | 31.73 |
| CDY34105 | Canola | nucleus | 15.06 | 31.65 |
| CDX90146 | Canola | nucleus | 16.27 | 31.4 |
| CDY69368 | Canola | nucleus | 16.27 | 31.4 |
| CDY02523 | Canola | nucleus | 15.96 | 31.18 |
| KXG36907 | Sorghum | nucleus | 30.42 | 30.89 |
| CDX90126 | Canola | nucleus | 21.08 | 29.91 |
| CDY11748 | Canola | nucleus | 20.78 | 29.87 |
| CDX97640 | Canola | nucleus | 16.57 | 29.1 |
| CDX75817 | Canola | nucleus | 17.77 | 28.92 |
| CDX82442 | Canola | nucleus | 17.77 | 28.92 |
| CDX94610 | Canola | nucleus | 14.46 | 28.92 |
| CDX98534 | Canola | nucleus | 16.87 | 28.57 |
| CDY22810 | Canola | nucleus | 17.47 | 28.57 |
| CDY15690 | Canola | nucleus | 20.48 | 28.45 |
| CDX89866 | Canola | nucleus | 15.36 | 28.33 |
| CDX94591 | Canola | nucleus | 20.48 | 28.22 |
| CDY15674 | Canola | nucleus | 15.06 | 28.09 |
| CDX96955 | Canola | nucleus | 16.27 | 27.98 |
| CDY14914 | Canola | nucleus | 16.27 | 27.98 |
| CDY37113 | Canola | mitochondrion, nucleus | 17.47 | 27.88 |
| CDY34107 | Canola | nucleus | 15.06 | 27.62 |
| CDY30806 | Canola | nucleus | 15.06 | 27.32 |
| CDY18185 | Canola | nucleus | 14.76 | 27.22 |
| CDY20105 | Canola | nucleus | 16.87 | 26.79 |
| CDX82253 | Canola | nucleus | 17.17 | 26.51 |
| CDY45936 | Canola | nucleus | 15.96 | 26.37 |
| CDY32314 | Canola | nucleus | 17.17 | 26.15 |
| CDY24111 | Canola | nucleus | 13.86 | 26.14 |
| CDX90145 | Canola | nucleus | 14.46 | 26.09 |
| CDY61213 | Canola | nucleus | 13.86 | 25.84 |
| CDY36045 | Canola | nucleus | 16.87 | 25.81 |
| CDY25874 | Canola | nucleus | 15.36 | 25.5 |
| CDY35734 | Canola | nucleus | 14.16 | 25.41 |
| CDY61906 | Canola | cytosol | 9.94 | 24.44 |
| CDY16037 | Canola | nucleus | 14.46 | 24.24 |
| CDY26598 | Canola | nucleus | 14.46 | 24.24 |
| CDY16048 | Canola | nucleus | 21.08 | 23.97 |
| CDY19407 | Canola | nucleus | 22.59 | 23.73 |
| CDY26605 | Canola | nucleus | 20.78 | 23.47 |
| CDY03876 | Canola | nucleus | 20.78 | 23.08 |
| CDY36131 | Canola | nucleus | 20.48 | 22.74 |
| CDY24422 | Canola | nucleus | 20.18 | 22.41 |
| CDY51586 | Canola | nucleus | 19.88 | 22.37 |
| CDY72607 | Canola | nucleus | 21.08 | 21.67 |
| CDX91091 | Canola | nucleus | 21.99 | 21.47 |
| CDX85621 | Canola | nucleus | 21.69 | 21.05 |
| CDX98022 | Canola | nucleus | 8.13 | 13.64 |
| CDY46294 | Canola | nucleus | 5.12 | 11.81 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | GO:A0A078ESS6 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | EnsemblPlants:CDY02618 |
| ProteinID:CDY02618 | ProteinID:CDY02618.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00114744001 | InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 |
| PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31677 | PANTHER:PTHR31677:SF40 | SMART:SM00380 | SUPFAM:SSF54171 |
| UniParc:UPI0004EF1B16 | SEG:seg | : | : | : | : |
Description
BnaC02g08170D
Coordinates
chrLK031936:+:423229..424227
Molecular Weight (calculated)
36591.1 Da
IEP (calculated)
5.981
GRAVY (calculated)
-0.626
Length
332 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTSKTLDNN KHFETSQTQM GFALINQNTT NATTATTGER RGRRSKQAEP GRFLGVRRRP WGRYAAEIRD PTTKERHWLG TFDTAHEAAL AYDRAALSMR
101: GTQARTNFVY TPNDVHTILT NPNLHSLIVS PYNNQSLLQN SSPQFVIDHH PHYQNYQQPK LSLPQTVLPA ASFKTPVRHQ NADIQAFGSS PQNSSSNGSL
201: SSSLDEENNF FSLEGSNSSN NSGYLDCIVP NHCLKPPPET TTIQNESGAG FTTPASKASE SYEGFSNSYF QDVDMMMEFG SCDLSAMITN YGAGTSMSME
301: DYAIMEPQNF SSSSIAAFGD VVADTTGFYS LY
101: GTQARTNFVY TPNDVHTILT NPNLHSLIVS PYNNQSLLQN SSPQFVIDHH PHYQNYQQPK LSLPQTVLPA ASFKTPVRHQ NADIQAFGSS PQNSSSNGSL
201: SSSLDEENNF FSLEGSNSSN NSGYLDCIVP NHCLKPPPET TTIQNESGAG FTTPASKASE SYEGFSNSYF QDVDMMMEFG SCDLSAMITN YGAGTSMSME
301: DYAIMEPQNF SSSSIAAFGD VVADTTGFYS LY
001: MSTSKTLDHN KPFETSQTQM GFALIHQNTS ANTTTTTTTG ERRGRRSKQA EPGRFLGVRR RPWGRYAAEI RDPTTKERHW LGTFDTAHEA ALAYDRAALS
101: MRGTQARTNF VYTPTDVHTI LTNPNLHSLI VSPYNNNQSF LPNSSPQFVI DHHPHYQNYH QPQQPKHTLP QTVLPAASFK TPVRHQSVDI QAFGNSPQNS
201: SSNGSLSSSL DEENNFFFSL TSEEHNKSNN NSGYLDCIVP NHCLKPPPEA TTTQNQAGAS FTTPVASKAS EPYGGFSNSY FEDGEMMMMN HHEFGSCDLS
301: AMITNYGAAA ASMSMEDYGM MEPQDLSSSS IAAFGDVVAD TTGFYSVF
101: MRGTQARTNF VYTPTDVHTI LTNPNLHSLI VSPYNNNQSF LPNSSPQFVI DHHPHYQNYH QPQQPKHTLP QTVLPAASFK TPVRHQSVDI QAFGNSPQNS
201: SSNGSLSSSL DEENNFFFSL TSEEHNKSNN NSGYLDCIVP NHCLKPPPEA TTTQNQAGAS FTTPVASKAS EPYGGFSNSY FEDGEMMMMN HHEFGSCDLS
301: AMITNYGAAA ASMSMEDYGM MEPQDLSSSS IAAFGDVVAD TTGFYSVF
Arabidopsis Description
ERF086PUCHI [Source:UniProtKB/TrEMBL;Acc:A0A178URC3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.