Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039658.1-P | Field mustard | nucleus | 99.43 | 99.43 |
| CDY61213 | Canola | nucleus | 94.89 | 93.82 |
| CDY25733 | Canola | nucleus | 53.41 | 68.12 |
| CDY02523 | Canola | nucleus | 63.64 | 65.88 |
| CDX97640 | Canola | nucleus | 65.34 | 60.85 |
| AT1G53170.1 | Thale cress | nucleus | 60.23 | 57.3 |
| CDX98534 | Canola | nucleus | 63.64 | 57.14 |
| CDX75817 | Canola | nucleus | 59.66 | 51.47 |
| CDX82442 | Canola | nucleus | 59.66 | 51.47 |
| CDY20105 | Canola | nucleus | 59.66 | 50.24 |
| CDY32314 | Canola | nucleus | 58.52 | 47.25 |
| KRH55195 | Soybean | nucleus | 47.73 | 45.9 |
| KRH27281 | Soybean | nucleus | 48.3 | 44.04 |
| KRH22040 | Soybean | nucleus | 48.3 | 44.04 |
| CDY45936 | Canola | nucleus | 50.0 | 43.78 |
| CDX90146 | Canola | nucleus | 42.05 | 43.02 |
| CDY25874 | Canola | nucleus | 48.86 | 43.0 |
| CDY69368 | Canola | nucleus | 41.48 | 42.44 |
| CDY70175 | Canola | nucleus | 40.34 | 42.26 |
| CDY15673 | Canola | nucleus | 40.34 | 42.26 |
| CDY70796 | Canola | nucleus | 37.5 | 40.99 |
| CDY34104 | Canola | nucleus | 36.93 | 40.12 |
| CDY34105 | Canola | nucleus | 35.8 | 39.87 |
| CDY14914 | Canola | nucleus | 40.91 | 37.31 |
| CDX89866 | Canola | nucleus | 38.07 | 37.22 |
| CDY18185 | Canola | nucleus | 38.07 | 37.22 |
| CDX96955 | Canola | nucleus | 40.34 | 36.79 |
| CDY61906 | Canola | cytosol | 27.27 | 35.56 |
| CDY34107 | Canola | nucleus | 35.8 | 34.81 |
| CDY30806 | Canola | nucleus | 34.66 | 33.33 |
| CDY15674 | Canola | nucleus | 33.52 | 33.15 |
| CDX94610 | Canola | nucleus | 31.25 | 33.13 |
| CDY22810 | Canola | nucleus | 37.5 | 32.51 |
| CDY35734 | Canola | nucleus | 34.09 | 32.43 |
| CDX90145 | Canola | nucleus | 33.52 | 32.07 |
| CDY37113 | Canola | mitochondrion, nucleus | 37.5 | 31.73 |
| CDX82253 | Canola | nucleus | 38.07 | 31.16 |
| CDY36045 | Canola | nucleus | 38.07 | 30.88 |
| CDX70526 | Canola | nucleus | 26.7 | 22.17 |
| CDX78545 | Canola | nucleus | 26.14 | 21.7 |
| CDX94591 | Canola | nucleus | 26.7 | 19.5 |
| CDY15690 | Canola | nucleus | 26.14 | 19.25 |
| CDY11748 | Canola | nucleus | 25.0 | 19.05 |
| CDX90126 | Canola | nucleus | 25.0 | 18.8 |
| CDY26605 | Canola | nucleus | 30.11 | 18.03 |
| CDY16048 | Canola | nucleus | 28.98 | 17.47 |
| CDY19407 | Canola | nucleus | 30.68 | 17.09 |
| CDY03876 | Canola | nucleus | 28.41 | 16.72 |
| CDY51586 | Canola | nucleus | 27.84 | 16.61 |
| CDY36131 | Canola | nucleus | 27.84 | 16.39 |
| CDY16037 | Canola | nucleus | 18.18 | 16.16 |
| CDY24422 | Canola | nucleus | 27.27 | 16.05 |
| CDY26598 | Canola | nucleus | 17.61 | 15.66 |
| CDY72607 | Canola | nucleus | 27.27 | 14.86 |
| CDY68296 | Canola | nucleus | 26.7 | 14.55 |
| CDX91091 | Canola | nucleus | 27.27 | 14.12 |
| CDX85621 | Canola | nucleus | 27.27 | 14.04 |
| CDY13901 | Canola | nucleus | 26.7 | 13.99 |
| CDX88931 | Canola | nucleus | 26.14 | 13.98 |
| CDY02618 | Canola | nucleus | 26.14 | 13.86 |
| CDY58106 | Canola | nucleus | 25.57 | 13.55 |
| CDX70826 | Canola | nucleus | 25.0 | 13.29 |
| CDX98022 | Canola | nucleus | 5.11 | 4.55 |
| CDY46294 | Canola | nucleus | 2.84 | 3.47 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | GO:A0A078GFG7 | UniProt:A0A078GFG7 | InterPro:AP2/ERF-transcript_factor | InterPro:AP2/ERF_dom |
| InterPro:AP2/ERF_dom_sf | EnsemblPlants:CDY24111 | ProteinID:CDY24111 | ProteinID:CDY24111.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00024662001 | InterPro:IPR001471 | InterPro:IPR036955 |
| PFAM:PF00847 | PIRSF:PIRSF038123 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | SMART:SM00380 |
| SUPFAM:SSF54171 | UniParc:UPI0004EE6371 | SEG:seg | : | : | : |
Description
BnaA06g01090DBnaA06g01090D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GFG7]
Coordinates
chrLK032153:+:518410..518940
Molecular Weight (calculated)
19154.7 Da
IEP (calculated)
10.454
GRAVY (calculated)
-0.691
Length
176 amino acids
Sequence
(BLAST)
(BLAST)
001: MKTGLKPDPN PVERNEKEVR YRGVRKRPWG RFAAEIRDPV KRTRVWLGTF DTAENAARAY DAAARDFRGP KAKTNFPPTV LELNANKEGR FARSPSQSST
101: VDSVSPTGRR LAALPQLELS LGGGGSGGGA CYDHVPVARP LYFYNNMKAF SPAGTCGGEK KPQPLNLDLT LAPPAE
101: VDSVSPTGRR LAALPQLELS LGGGGSGGGA CYDHVPVARP LYFYNNMKAF SPAGTCGGEK KPQPLNLDLT LAPPAE
001: MAKMGLKPDP ATTNQTHNNA KEIRYRGVRK RPWGRYAAEI RDPGKKTRVW LGTFDTAEEA ARAYDTAARD FRGAKAKTNF PTFLELSDQK VPTGFARSPS
101: QSSTLDCASP PTLVVPSATA GNVPPQLELS LGGGGGGSCY QIPMSRPVYF LDLMGIGNVG RGQPPPVTSA FRSPVVHVAT KMACGAQSDS DSSSVVDFEG
201: GMEKRSQLLD LDLNLPPPSE QA
101: QSSTLDCASP PTLVVPSATA GNVPPQLELS LGGGGGGSCY QIPMSRPVYF LDLMGIGNVG RGQPPPVTSA FRSPVVHVAT KMACGAQSDS DSSSVVDFEG
201: GMEKRSQLLD LDLNLPPPSE QA
Arabidopsis Description
ERF4Ethylene-responsive transcription factor 4 [Source:UniProtKB/Swiss-Prot;Acc:O80340]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.