Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY24111 | Canola | nucleus | 93.82 | 94.89 |
| CDY25733 | Canola | nucleus | 55.06 | 71.01 |
| CDY02523 | Canola | nucleus | 64.61 | 67.65 |
| CDX97640 | Canola | nucleus | 66.85 | 62.96 |
| CDX98534 | Canola | nucleus | 65.17 | 59.18 |
| AT1G53170.1 | Thale cress | nucleus | 60.11 | 57.84 |
| CDX75817 | Canola | nucleus | 60.67 | 52.94 |
| CDY20105 | Canola | nucleus | 61.8 | 52.63 |
| CDX82442 | Canola | nucleus | 60.11 | 52.45 |
| CDY32314 | Canola | nucleus | 60.67 | 49.54 |
| KRH55195 | Soybean | nucleus | 47.19 | 45.9 |
| KRH27281 | Soybean | nucleus | 48.31 | 44.56 |
| KRH22040 | Soybean | nucleus | 48.31 | 44.56 |
| CDY45936 | Canola | nucleus | 50.0 | 44.28 |
| CDY25874 | Canola | nucleus | 48.88 | 43.5 |
| CDX90146 | Canola | nucleus | 41.57 | 43.02 |
| CDY70175 | Canola | nucleus | 40.45 | 42.86 |
| CDY15673 | Canola | nucleus | 40.45 | 42.86 |
| CDY69368 | Canola | nucleus | 41.01 | 42.44 |
| CDY70796 | Canola | nucleus | 37.64 | 41.61 |
| CDY34104 | Canola | nucleus | 37.08 | 40.74 |
| CDY34105 | Canola | nucleus | 35.96 | 40.51 |
| CDY14914 | Canola | nucleus | 40.45 | 37.31 |
| CDX96955 | Canola | nucleus | 39.89 | 36.79 |
| CDY18185 | Canola | nucleus | 37.08 | 36.67 |
| CDX89866 | Canola | nucleus | 37.08 | 36.67 |
| CDY61906 | Canola | cytosol | 27.53 | 36.3 |
| CDY34107 | Canola | nucleus | 35.96 | 35.36 |
| CDY30806 | Canola | nucleus | 34.83 | 33.88 |
| CDY15674 | Canola | nucleus | 33.71 | 33.71 |
| CDX94610 | Canola | nucleus | 30.9 | 33.13 |
| CDY35734 | Canola | nucleus | 33.71 | 32.43 |
| CDX90145 | Canola | nucleus | 33.15 | 32.07 |
| CDY22810 | Canola | nucleus | 36.52 | 32.02 |
| CDY37113 | Canola | mitochondrion, nucleus | 36.52 | 31.25 |
| CDX82253 | Canola | nucleus | 37.08 | 30.7 |
| CDY36045 | Canola | nucleus | 37.08 | 30.41 |
| CDX70526 | Canola | nucleus | 25.84 | 21.7 |
| CDX78545 | Canola | nucleus | 25.28 | 21.23 |
| CDX90126 | Canola | nucleus | 25.28 | 19.23 |
| CDX94591 | Canola | nucleus | 25.84 | 19.09 |
| CDY11748 | Canola | nucleus | 24.72 | 19.05 |
| CDY15690 | Canola | nucleus | 25.28 | 18.83 |
| CDY26605 | Canola | nucleus | 29.78 | 18.03 |
| CDY16048 | Canola | nucleus | 28.65 | 17.47 |
| CDY19407 | Canola | nucleus | 29.78 | 16.77 |
| CDY03876 | Canola | nucleus | 28.09 | 16.72 |
| CDY51586 | Canola | nucleus | 27.53 | 16.61 |
| CDY36131 | Canola | nucleus | 27.53 | 16.39 |
| CDY24422 | Canola | nucleus | 26.97 | 16.05 |
| CDY16037 | Canola | nucleus | 17.42 | 15.66 |
| CDY26598 | Canola | nucleus | 16.85 | 15.15 |
| CDY68296 | Canola | nucleus | 26.4 | 14.55 |
| CDY72607 | Canola | nucleus | 26.4 | 14.55 |
| CDY13901 | Canola | nucleus | 26.4 | 13.99 |
| CDX88931 | Canola | nucleus | 25.84 | 13.98 |
| CDY02618 | Canola | nucleus | 25.84 | 13.86 |
| CDX91091 | Canola | nucleus | 26.4 | 13.82 |
| CDX85621 | Canola | nucleus | 26.4 | 13.74 |
| CDY58106 | Canola | nucleus | 25.28 | 13.55 |
| CDX70826 | Canola | nucleus | 24.72 | 13.29 |
| CDX98022 | Canola | nucleus | 4.49 | 4.04 |
| CDY46294 | Canola | nucleus | 2.81 | 3.47 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | GO:A0A078J4Q0 | UniProt:A0A078J4Q0 | InterPro:AP2/ERF-transcript_factor | InterPro:AP2/ERF_dom |
| InterPro:AP2/ERF_dom_sf | EnsemblPlants:CDY61213 | ProteinID:CDY61213 | ProteinID:CDY61213.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00030721001 | InterPro:IPR001471 | InterPro:IPR036955 |
| PFAM:PF00847 | PIRSF:PIRSF038123 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | SMART:SM00380 |
| SUPFAM:SSF54171 | UniParc:UPI0004EAB347 | SEG:seg | : | : | : |
Description
BnaC06g41440DBnaC06g41440D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J4Q0]
Coordinates
chrLK033969:-:26650..27186
Molecular Weight (calculated)
19030.5 Da
IEP (calculated)
10.332
GRAVY (calculated)
-0.607
Length
178 amino acids
Sequence
(BLAST)
(BLAST)
001: MKTGLKPDPN PVESNGKEVR YRGVRKRPWG RFAAEIRDPV KRTRVWLGTF DTAEHAARAY DAAARDFRGA KAKTNFPPTV LELNANKEGG FARSPSQSST
101: VDSVSPTGRR LATLPQLELS LGGGGGGGGG GACYDQVPVA RPLYFYNNMK AFSPAATCGG EKKPQPLNLD LTLAPPAE
101: VDSVSPTGRR LATLPQLELS LGGGGGGGGG GACYDQVPVA RPLYFYNNMK AFSPAATCGG EKKPQPLNLD LTLAPPAE
001: MPNITMGLKP DPVAPTNPTH HESNAAKEIR YRGVRKRPWG RYAAEIRDPV KKTRVWLGTF DTAQQAARAY DAAARDFRGV KAKTNFGVIV GSSPTQSSTV
101: VDSPTAARFI TPPHLELSLG GGGACRRKIP LVHPVYYYNM ATYPKMTTCG VQSESETSSV VDFEGGAGKI SPPLDLDLNL APPAE
101: VDSPTAARFI TPPHLELSLG GGGACRRKIP LVHPVYYYNM ATYPKMTTCG VQSESETSSV VDFEGGAGKI SPPLDLDLNL APPAE
Arabidopsis Description
ERF8Ethylene-responsive transcription factor 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAI5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.