Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX88931 | Canola | nucleus | 94.86 | 95.44 |
| CDY58106 | Canola | nucleus | 84.29 | 84.04 |
| CDY02618 | Canola | nucleus | 83.99 | 83.73 |
| AT5G18560.1 | Thale cress | nucleus | 87.01 | 82.76 |
| CDY13901 | Canola | nucleus | 83.38 | 82.14 |
| CDY68296 | Canola | nucleus | 79.15 | 81.11 |
| Solyc01g067540.1.1 | Tomato | nucleus | 33.23 | 34.27 |
| CDY15673 | Canola | nucleus | 17.22 | 33.93 |
| CDY70175 | Canola | nucleus | 17.22 | 33.93 |
| CDY25733 | Canola | nucleus | 13.9 | 33.33 |
| CDX90146 | Canola | nucleus | 16.92 | 32.56 |
| CDY69368 | Canola | nucleus | 16.92 | 32.56 |
| GSMUA_Achr8P30180_001 | Banana | nucleus | 30.21 | 32.05 |
| CDY70796 | Canola | nucleus | 15.41 | 31.68 |
| CDX78545 | Canola | nucleus | 20.24 | 31.6 |
| CDX70526 | Canola | nucleus | 20.24 | 31.6 |
| Zm00001d007119_P001 | Maize | nucleus | 28.1 | 31.42 |
| PGSC0003DMT400058356 | Potato | nucleus | 32.33 | 31.38 |
| TraesCS2A01G116900.1 | Wheat | nucleus | 28.1 | 31.1 |
| CDY34105 | Canola | nucleus | 14.8 | 31.01 |
| CDY34104 | Canola | nucleus | 15.11 | 30.86 |
| Zm00001d022488_P001 | Maize | nucleus | 29.31 | 30.79 |
| CDY02523 | Canola | nucleus | 15.71 | 30.59 |
| TraesCS2D01G118200.1 | Wheat | nucleus, plastid | 27.19 | 30.51 |
| Os07t0669500-01 | Rice | nucleus, plastid | 29.0 | 30.19 |
| TraesCS2B01G136100.1 | Wheat | nucleus | 27.79 | 29.97 |
| KXG36907 | Sorghum | nucleus | 29.31 | 29.66 |
| CDX90126 | Canola | nucleus | 20.24 | 28.63 |
| CDY11748 | Canola | nucleus | 19.94 | 28.57 |
| CDX94610 | Canola | nucleus | 14.2 | 28.31 |
| CDY15674 | Canola | nucleus | 15.11 | 28.09 |
| CDY22810 | Canola | nucleus | 17.22 | 28.08 |
| CDX97640 | Canola | nucleus | 16.01 | 28.04 |
| CDX82442 | Canola | nucleus | 17.22 | 27.94 |
| CDX75817 | Canola | nucleus | 17.22 | 27.94 |
| CDY15690 | Canola | nucleus | 19.94 | 27.62 |
| CDX98534 | Canola | nucleus | 16.31 | 27.55 |
| CDY37113 | Canola | mitochondrion, nucleus | 17.22 | 27.4 |
| CDX94591 | Canola | nucleus | 19.94 | 27.39 |
| CDY34107 | Canola | nucleus | 14.8 | 27.07 |
| CDY30806 | Canola | nucleus | 14.8 | 26.78 |
| CDX89866 | Canola | nucleus | 14.5 | 26.67 |
| CDX82253 | Canola | nucleus | 17.22 | 26.51 |
| CDX90145 | Canola | nucleus | 14.5 | 26.09 |
| CDX96955 | Canola | nucleus | 15.11 | 25.91 |
| CDY14914 | Canola | nucleus | 15.11 | 25.91 |
| CDY36045 | Canola | nucleus | 16.92 | 25.81 |
| CDY18185 | Canola | nucleus | 13.9 | 25.56 |
| CDY35734 | Canola | nucleus | 14.2 | 25.41 |
| CDY20105 | Canola | nucleus | 16.01 | 25.36 |
| CDY24111 | Canola | nucleus | 13.29 | 25.0 |
| CDY32314 | Canola | nucleus | 16.31 | 24.77 |
| CDY61213 | Canola | nucleus | 13.29 | 24.72 |
| CDY45936 | Canola | nucleus | 14.8 | 24.38 |
| CDY61906 | Canola | cytosol | 9.67 | 23.7 |
| CDY25874 | Canola | nucleus | 14.2 | 23.5 |
| CDY16048 | Canola | nucleus | 20.24 | 22.95 |
| CDY26598 | Canola | nucleus | 13.6 | 22.73 |
| CDY16037 | Canola | nucleus | 13.6 | 22.73 |
| CDY26605 | Canola | nucleus | 19.94 | 22.45 |
| CDY24422 | Canola | nucleus | 20.24 | 22.41 |
| CDY03876 | Canola | nucleus | 20.24 | 22.41 |
| CDY19407 | Canola | nucleus | 21.15 | 22.15 |
| CDY36131 | Canola | nucleus | 19.94 | 22.07 |
| CDY51586 | Canola | nucleus | 19.34 | 21.69 |
| CDY72607 | Canola | nucleus | 20.24 | 20.74 |
| CDX91091 | Canola | nucleus | 20.24 | 19.71 |
| CDX85621 | Canola | nucleus | 20.24 | 19.59 |
| CDX98022 | Canola | nucleus | 8.16 | 13.64 |
| CDY46294 | Canola | nucleus | 5.14 | 11.81 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | GO:A0A078C1F5 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | EnsemblPlants:CDX70826 |
| ProteinID:CDX70826 | ProteinID:CDX70826.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00140711001 | InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 |
| PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31677 | PANTHER:PTHR31677:SF40 | SMART:SM00380 | SUPFAM:SSF54171 |
| UniParc:UPI0004EF0233 | SEG:seg | : | : | : | : |
Description
BnaC03g09100D
Coordinates
chrLK031791:-:2212572..2213567
Molecular Weight (calculated)
36571.8 Da
IEP (calculated)
6.656
GRAVY (calculated)
-0.720
Length
331 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTSKTLDHI KPYETSQTQM GFAIINQNTA TTTTTTTGER RGRRSKQAEP GRFLGVRRRP WGRYAAEIRD PTTKERHWLG TFDTTHEAAL AYDRAALSMR
101: GTQGRTNFAY TPTDVHTILT NPNLHSLIVS PYNNNQSFLP NSSPQFVIDH HPHYQNYHHH QQPKHIPTVS FKTPVRHQNA DIQAFSSSPQ NSSSNGSLSS
201: SLDEEHNFFS FDGSNSSNNS GYLDCIVPNH CLKPPLETTT TQSQTGADFT TPASKASDSY GGFNNSSFED GDMMMMMNHH EFGSCDLSAM ITNYGAAASM
301: SMEPQDFSSA SSSSVAAFGD VSDTTGFYSL Y
101: GTQGRTNFAY TPTDVHTILT NPNLHSLIVS PYNNNQSFLP NSSPQFVIDH HPHYQNYHHH QQPKHIPTVS FKTPVRHQNA DIQAFSSSPQ NSSSNGSLSS
201: SLDEEHNFFS FDGSNSSNNS GYLDCIVPNH CLKPPLETTT TQSQTGADFT TPASKASDSY GGFNNSSFED GDMMMMMNHH EFGSCDLSAM ITNYGAAASM
301: SMEPQDFSSA SSSSVAAFGD VSDTTGFYSL Y
001: MSTSKTLDHN KPFETSQTQM GFALIHQNTS ANTTTTTTTG ERRGRRSKQA EPGRFLGVRR RPWGRYAAEI RDPTTKERHW LGTFDTAHEA ALAYDRAALS
101: MRGTQARTNF VYTPTDVHTI LTNPNLHSLI VSPYNNNQSF LPNSSPQFVI DHHPHYQNYH QPQQPKHTLP QTVLPAASFK TPVRHQSVDI QAFGNSPQNS
201: SSNGSLSSSL DEENNFFFSL TSEEHNKSNN NSGYLDCIVP NHCLKPPPEA TTTQNQAGAS FTTPVASKAS EPYGGFSNSY FEDGEMMMMN HHEFGSCDLS
301: AMITNYGAAA ASMSMEDYGM MEPQDLSSSS IAAFGDVVAD TTGFYSVF
101: MRGTQARTNF VYTPTDVHTI LTNPNLHSLI VSPYNNNQSF LPNSSPQFVI DHHPHYQNYH QPQQPKHTLP QTVLPAASFK TPVRHQSVDI QAFGNSPQNS
201: SSNGSLSSSL DEENNFFFSL TSEEHNKSNN NSGYLDCIVP NHCLKPPPEA TTTQNQAGAS FTTPVASKAS EPYGGFSNSY FEDGEMMMMN HHEFGSCDLS
301: AMITNYGAAA ASMSMEDYGM MEPQDLSSSS IAAFGDVVAD TTGFYSVF
Arabidopsis Description
ERF086PUCHI [Source:UniProtKB/TrEMBL;Acc:A0A178URC3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.