Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra010901.1-P | Field mustard | nucleus | 94.81 | 93.59 |
| CDX90126 | Canola | nucleus | 94.81 | 93.59 |
| CDY15690 | Canola | nucleus | 83.55 | 80.75 |
| CDX94591 | Canola | nucleus | 83.98 | 80.5 |
| AT1G28160.1 | Thale cress | nucleus | 85.28 | 80.41 |
| CDY46294 | Canola | nucleus | 45.45 | 72.92 |
| CDX78545 | Canola | nucleus | 36.36 | 39.62 |
| CDX70526 | Canola | nucleus | 35.93 | 39.15 |
| GSMUA_Achr6P35320_001 | Banana | nucleus | 22.51 | 36.36 |
| KRG91757 | Soybean | mitochondrion, nucleus | 22.08 | 35.92 |
| Solyc04g072300.1.1 | Tomato | mitochondrion, nucleus | 23.81 | 34.38 |
| PGSC0003DMT400056527 | Potato | nucleus | 23.81 | 34.38 |
| CDY25733 | Canola | nucleus | 20.35 | 34.06 |
| GSMUA_Achr7P17910_001 | Banana | nucleus | 22.94 | 32.72 |
| KRH35019 | Soybean | nucleus, plastid | 22.08 | 32.48 |
| Os08t0173700-01 | Rice | nucleus | 24.24 | 32.0 |
| KXG24553 | Sorghum | nucleus | 22.94 | 30.81 |
| CDY70796 | Canola | nucleus | 21.21 | 30.43 |
| CDY70175 | Canola | nucleus | 22.08 | 30.36 |
| CDY34104 | Canola | nucleus | 21.21 | 30.25 |
| CDY15673 | Canola | nucleus | 21.64 | 29.76 |
| CDX90146 | Canola | nucleus | 22.08 | 29.65 |
| CDY69368 | Canola | nucleus | 22.08 | 29.65 |
| CDY34105 | Canola | nucleus | 19.91 | 29.11 |
| Zm00001d024436_P001 | Maize | nucleus | 23.38 | 29.03 |
| CDX94610 | Canola | nucleus | 20.78 | 28.92 |
| CDY02523 | Canola | nucleus | 20.78 | 28.24 |
| CDY15674 | Canola | nucleus | 21.21 | 27.53 |
| CDX89866 | Canola | nucleus | 21.21 | 27.22 |
| CDY18185 | Canola | nucleus | 20.78 | 26.67 |
| CDX90145 | Canola | nucleus | 21.21 | 26.63 |
| CDY34107 | Canola | nucleus | 20.78 | 26.52 |
| CDY35734 | Canola | nucleus | 21.21 | 26.49 |
| CDY14914 | Canola | nucleus | 22.08 | 26.42 |
| CDY30806 | Canola | nucleus | 20.78 | 26.23 |
| CDX97640 | Canola | nucleus | 21.21 | 25.93 |
| CDX96955 | Canola | nucleus | 21.64 | 25.91 |
| CDX98534 | Canola | nucleus | 21.64 | 25.51 |
| CDY72607 | Canola | nucleus | 35.06 | 25.08 |
| CDY24111 | Canola | nucleus | 19.05 | 25.0 |
| CDY61213 | Canola | nucleus | 19.05 | 24.72 |
| CDX91091 | Canola | nucleus | 36.36 | 24.71 |
| CDX82442 | Canola | nucleus | 21.64 | 24.51 |
| CDX75817 | Canola | nucleus | 21.64 | 24.51 |
| CDX85621 | Canola | nucleus | 35.5 | 23.98 |
| CDY45936 | Canola | nucleus | 20.78 | 23.88 |
| CDY25874 | Canola | nucleus | 20.35 | 23.5 |
| CDX82253 | Canola | nucleus | 21.64 | 23.26 |
| CDY22810 | Canola | nucleus | 20.35 | 23.15 |
| CDY37113 | Canola | mitochondrion, nucleus | 20.78 | 23.08 |
| CDY20105 | Canola | nucleus | 20.78 | 22.97 |
| CDY36045 | Canola | nucleus | 21.21 | 22.58 |
| CDY61906 | Canola | cytosol | 12.99 | 22.22 |
| CDY32314 | Canola | nucleus | 20.78 | 22.02 |
| CDY26598 | Canola | nucleus | 18.18 | 21.21 |
| CDY16037 | Canola | nucleus | 18.18 | 21.21 |
| CDY02618 | Canola | nucleus | 29.87 | 20.78 |
| CDY68296 | Canola | nucleus | 29.0 | 20.74 |
| CDY36131 | Canola | nucleus | 26.84 | 20.74 |
| CDY51586 | Canola | nucleus | 26.41 | 20.68 |
| CDY58106 | Canola | nucleus | 29.44 | 20.48 |
| CDY24422 | Canola | nucleus | 26.41 | 20.4 |
| CDY13901 | Canola | nucleus | 29.44 | 20.24 |
| CDY03876 | Canola | nucleus | 25.97 | 20.07 |
| CDX88931 | Canola | nucleus | 28.57 | 20.06 |
| CDX70826 | Canola | nucleus | 28.57 | 19.94 |
| CDY19407 | Canola | nucleus | 26.84 | 19.62 |
| CDY26605 | Canola | nucleus | 24.68 | 19.39 |
| CDY16048 | Canola | nucleus | 24.24 | 19.18 |
| CDX98022 | Canola | nucleus | 6.06 | 7.07 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | GO:A0A078FI36 | UniProt:A0A078FI36 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| EnsemblPlants:CDY11748 | ProteinID:CDY11748 | ProteinID:CDY11748.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00049966001 | InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 |
| PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31677 | PANTHER:PTHR31677:SF9 | SMART:SM00380 | SUPFAM:SSF54171 |
| UniParc:UPI0004EAC834 | SEG:seg | : | : | : | : |
Description
BnaC03g58300DBnaC03g58300D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FI36]
Coordinates
chrLK032014:-:61723..62418
Molecular Weight (calculated)
25940.4 Da
IEP (calculated)
4.923
GRAVY (calculated)
-0.836
Length
231 amino acids
Sequence
(BLAST)
(BLAST)
001: MDFNGNSFAG SASRSKKSHR QNQQQQQPQP QHNEEIKYVG VRRRPWGRYA AEIRNPTTKE RYWLGTFDTA EEAALAYDRA ARSIRGLTAR TNFVYSDMPR
101: GSSVTSFISP DESQRFISEL FNPSSQLEAS NNINNLYSST NNGWPQESEC GGYTCINTND EHCDHELPPF PPSTCFGAEL MIPETDSYWN VVHASMNAFS
201: FEPDGFVGQN SLGESGTKGF DSSSSTFFYQ S
101: GSSVTSFISP DESQRFISEL FNPSSQLEAS NNINNLYSST NNGWPQESEC GGYTCINTND EHCDHELPPF PPSTCFGAEL MIPETDSYWN VVHASMNAFS
201: FEPDGFVGQN SLGESGTKGF DSSSSTFFYQ S
001: MEFNGNLNAG SCSRSKKSHR QKQQQPQPQP QQHIEEIKYV GVRRRPWGRY AAEIRNPTTK ERYWLGTFDT AEEAALAYDR AARSIRGLTA RTNFVYSDMP
101: RGSSVTSFVS PDESQRFISE LFNPPSQLEA TNSNNNNNNN LYSSTNNQNQ NSIEFSYNGW PQEAECGYQS ITSNAEHCDH ELPPLPPSTC FGAELRIPET
201: DSYWNVAHAS IDTFAFELDG FVDQNSLGQS GTEGFNSLPS TFFYQ
101: RGSSVTSFVS PDESQRFISE LFNPPSQLEA TNSNNNNNNN LYSSTNNQNQ NSIEFSYNGW PQEAECGYQS ITSNAEHCDH ELPPLPPSTC FGAELRIPET
201: DSYWNVAHAS IDTFAFELDG FVDQNSLGQS GTEGFNSLPS TFFYQ
Arabidopsis Description
ERF087Ethylene-responsive transcription factor ERF087 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ90]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.