Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX94591 | Canola | nucleus | 84.49 | 85.89 |
| Bra030076.1-P | Field mustard | nucleus | 84.49 | 85.89 |
| Bra010901.1-P | Field mustard | nucleus | 81.63 | 85.47 |
| CDX90126 | Canola | nucleus | 81.63 | 85.47 |
| CDY15690 | Canola | nucleus | 83.27 | 85.36 |
| CDY11748 | Canola | nucleus | 80.41 | 85.28 |
| AT5G13910.1 | Thale cress | nucleus | 36.33 | 42.18 |
| GSMUA_Achr6P35320_001 | Banana | nucleus | 21.63 | 37.06 |
| KRG91757 | Soybean | mitochondrion, nucleus | 21.22 | 36.62 |
| Solyc04g072300.1.1 | Tomato | mitochondrion, nucleus | 22.86 | 35.0 |
| PGSC0003DMT400056527 | Potato | nucleus | 22.86 | 35.0 |
| KRH35019 | Soybean | nucleus, plastid | 21.22 | 33.12 |
| GSMUA_Achr7P17910_001 | Banana | nucleus | 21.63 | 32.72 |
| Os08t0173700-01 | Rice | nucleus | 22.45 | 31.43 |
| KXG24553 | Sorghum | nucleus | 21.63 | 30.81 |
| AT1G12890.1 | Thale cress | nucleus | 26.94 | 30.14 |
| Zm00001d024436_P001 | Maize | nucleus | 22.04 | 29.03 |
| AT1G53170.1 | Thale cress | nucleus | 21.22 | 28.11 |
| AT1G28360.1 | Thale cress | nucleus | 20.41 | 26.45 |
| AT1G28370.2 | Thale cress | mitochondrion, nucleus, plastid | 20.41 | 24.51 |
| AT3G15210.1 | Thale cress | nucleus | 22.04 | 24.32 |
| AT5G44210.1 | Thale cress | nucleus | 19.59 | 24.0 |
| AT1G50640.1 | Thale cress | mitochondrion, nucleus | 21.63 | 23.56 |
| AT3G20310.1 | Thale cress | nucleus | 20.41 | 20.49 |
| AT1G24590.1 | Thale cress | nucleus | 25.31 | 20.26 |
| AT1G03800.1 | Thale cress | nucleus | 20.0 | 20.0 |
| AT5G18560.1 | Thale cress | nucleus | 28.16 | 19.83 |
| AT1G12980.1 | Thale cress | nucleus | 24.08 | 17.99 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | EntrezGene:839710 | ProteinID:AAF98440.1 | ProteinID:AAG51490.1 | ProteinID:AEE30926.1 |
| InterPro:AP2/ERF-transcript_factor | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | ArrayExpress:AT1G28160 | EnsemblPlantsGene:AT1G28160 | RefSeq:AT1G28160 |
| TAIR:AT1G28160 | RefSeq:AT1G28160-TAIR-G | EnsemblPlants:AT1G28160.1 | TAIR:AT1G28160.1 | EMBL:AY560863 | Unigene:At.50650 |
| InterPro:DNA-bd_dom_sf | EMBL:DQ446295 | EMBL:DQ652864 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009873 | GO:GO:0009987 | InterPro:IPR001471 |
| InterPro:IPR036955 | RefSeq:NP_174138.1 | PFAM:PF00847 | PIRSF:PIRSF038123 | PRINTS:PR00367 | PFscan:PS51032 |
| PANTHER:PTHR31677 | PANTHER:PTHR31677:SF9 | UniProt:Q9FZ90 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI00000A66F5 |
| SEG:seg | : | : | : | : | : |
Description
ERF087Ethylene-responsive transcription factor ERF087 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ90]
Coordinates
chr1:+:9839316..9840124
Molecular Weight (calculated)
27704.5 Da
IEP (calculated)
4.949
GRAVY (calculated)
-0.890
Length
245 amino acids
Sequence
(BLAST)
(BLAST)
001: MEFNGNLNAG SCSRSKKSHR QKQQQPQPQP QQHIEEIKYV GVRRRPWGRY AAEIRNPTTK ERYWLGTFDT AEEAALAYDR AARSIRGLTA RTNFVYSDMP
101: RGSSVTSFVS PDESQRFISE LFNPPSQLEA TNSNNNNNNN LYSSTNNQNQ NSIEFSYNGW PQEAECGYQS ITSNAEHCDH ELPPLPPSTC FGAELRIPET
201: DSYWNVAHAS IDTFAFELDG FVDQNSLGQS GTEGFNSLPS TFFYQ
101: RGSSVTSFVS PDESQRFISE LFNPPSQLEA TNSNNNNNNN LYSSTNNQNQ NSIEFSYNGW PQEAECGYQS ITSNAEHCDH ELPPLPPSTC FGAELRIPET
201: DSYWNVAHAS IDTFAFELDG FVDQNSLGQS GTEGFNSLPS TFFYQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.