Factsheet for AT1G12980.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY19407	Canola	nucleus	60.06	62.34
Bra019801.1-P	Field mustard	nucleus	60.37	60.92
CDY16048	Canola	nucleus	50.0	56.16
CDY26605	Canola	nucleus	50.0	55.78
Bra026942.1-P	Field mustard	nucleus	50.0	55.78
CDX98022	Canola	nucleus	30.18	50.0
HORVU6Hr1G053460.1	Barley	nucleus	17.38	32.2
AT1G24590.1	Thale cress	nucleus	29.57	31.7
AT1G53170.1	Thale cress	nucleus	16.77	29.73
GSMUA_AchrUn_...	Banana	nucleus	25.0	29.29
AT1G28370.2	Thale cress	mitochondrion, nucleus, plastid	17.38	27.94
AT3G15210.1	Thale cress	nucleus	18.6	27.48
GSMUA_Achr9P01870_001	Banana	nucleus	24.09	27.43
AT5G13910.1	Thale cress	nucleus	17.38	27.01
AT1G28360.1	Thale cress	nucleus	15.24	26.45
AT1G12890.1	Thale cress	nucleus	17.38	26.03
AT5G44210.1	Thale cress	nucleus	15.85	26.0
GSMUA_Achr3P19420_001	Banana	nucleus	22.26	25.7
AT1G28160.1	Thale cress	nucleus	17.99	24.08
AT1G50640.1	Thale cress	mitochondrion, nucleus	15.85	23.11
Zm00001d050948_P001	Maize	nucleus	20.43	22.79
EES05354	Sorghum	nucleus	21.04	22.26
AT3G20310.1	Thale cress	nucleus	16.46	22.13
TraesCS6B01G237700.1	Wheat	nucleus	19.21	21.14
TraesCS6D01G192200.1	Wheat	nucleus	19.21	21.14
TraesCS6A01G208700.1	Wheat	nucleus	19.21	21.07
AT1G03800.1	Thale cress	nucleus	15.55	20.82
AT5G18560.1	Thale cress	nucleus	20.73	19.54
Os02t0594300-00	Rice	nucleus	19.51	18.55

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	EntrezGene:837856	ProteinID:AAD31052.1	ProteinID:AEE28956.1	EMBL:AF353577
InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	ArrayExpress:AT1G12980	EnsemblPlantsGene:AT1G12980	RefSeq:AT1G12980	TAIR:AT1G12980
RefSeq:AT1G12980-TAIR-G	EnsemblPlants:AT1G12980.1	TAIR:AT1G12980.1	Unigene:At.28308	InterPro:DNA-bd_dom_sf	Symbol:ESR1
GO:GO:0000003	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0005829	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154	GO:GO:0007165
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009653	GO:GO:0009719
GO:GO:0009734	GO:GO:0009735	GO:GO:0009736	GO:GO:0009790	GO:GO:0009791	GO:GO:0009873
GO:GO:0009880	GO:GO:0009987	GO:GO:0048825	GO:GO:0090708	GO:GO:1905392	InterPro:IPR001471
InterPro:IPR036955	RefSeq:NP_172758.1	PFAM:PF00847	PO:PO:0000001	PO:PO:0001185	PO:PO:0004507
PO:PO:0006362	PO:PO:0009009	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31677	PANTHER:PTHR31677:SF9
UniProt:Q9SAD4	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI0000047AD9	SEG:seg	:

Description

ESR1Ethylene-responsive transcription factor ESR1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAD4]

Coordinates

chr1:+:4429718..4430965

Molecular Weight (calculated)

36320.9 Da

IEP (calculated)

9.082

GRAVY (calculated)

-0.771

Length

328 amino acids

Sequence
(BLAST)

001: MEKALRNFTE STHSPDPNPL TKFFTEPTAS PVSRNRKLSS KDTTVTIAGA GSSTTRYRGV RRRPWGRYAA EIRDPMSKER RWLGTFDTAE QAACAYDSAA
101: RAFRGAKART NFTYPTAVIM PEPRFSFSNK KSSPSARCPL PSLPLDSSTQ NFYGAPAAQR IYNTQSIFLR DASCSSRKTT PYNNSFNGSS SSYSASKTAC
201: VSYSENENNE SFFPEESSDT GLLQEVVQEF LKKNRGVPPS PPTPPPVTSH HDNSGYFSNL TIYSENMVQE TKETLSSKLD RYGNFQANDD GVRAVADGGL
301: SLGSNEWGYQ EMLMYGTQLG CTCRRSWG

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.