Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX97640 | Canola | nucleus | 74.77 | 87.83 |
| Bra027270.1-P | Field mustard | nucleus | 61.26 | 85.0 |
| CDX75817 | Canola | nucleus | 77.93 | 84.8 |
| CDX98534 | Canola | nucleus | 74.77 | 84.69 |
| Bra001588.1-P | Field mustard | nucleus | 80.18 | 84.36 |
| CDX82442 | Canola | nucleus | 77.03 | 83.82 |
| Bra021594.1-P | Field mustard | nucleus | 75.23 | 78.4 |
| CDY20105 | Canola | nucleus | 73.42 | 77.99 |
| CDY32314 | Canola | nucleus | 75.68 | 77.06 |
| Bra003701.1-P | Field mustard | nucleus | 62.61 | 71.28 |
| AT1G53170.1 | Thale cress | nucleus | 52.7 | 63.24 |
| KRH26242 | Soybean | nucleus | 34.23 | 58.91 |
| AT1G28370.2 | Thale cress | mitochondrion, nucleus, plastid | 38.74 | 42.16 |
| AT5G44210.1 | Thale cress | nucleus | 34.23 | 38.0 |
| AT1G28360.1 | Thale cress | nucleus | 31.53 | 37.04 |
| AT1G50640.1 | Thale cress | mitochondrion, nucleus | 36.49 | 36.0 |
| AT3G20310.1 | Thale cress | nucleus | 36.04 | 32.79 |
| AT1G03800.1 | Thale cress | nucleus | 32.43 | 29.39 |
| AT5G13910.1 | Thale cress | nucleus | 24.77 | 26.07 |
| AT1G12890.1 | Thale cress | nucleus | 23.87 | 24.2 |
| AT1G28160.1 | Thale cress | nucleus | 24.32 | 22.04 |
| AT1G12980.1 | Thale cress | nucleus | 27.48 | 18.6 |
| AT1G24590.1 | Thale cress | nucleus | 25.23 | 18.3 |
| AT5G18560.1 | Thale cress | nucleus | 26.58 | 16.95 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | EntrezGene:820752 | UniProt:A0A178VDX3 | EMBL:AB008106 | ProteinID:AEE75632.1 |
| EMBL:AF003098 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | ArrayExpress:AT3G15210 | EnsemblPlantsGene:AT3G15210 | RefSeq:AT3G15210 |
| TAIR:AT3G15210 | RefSeq:AT3G15210-TAIR-G | EnsemblPlants:AT3G15210.1 | TAIR:AT3G15210.1 | Symbol:ATERF-4 | EMBL:AY086232 |
| EMBL:AY140030 | ProteinID:BAB02150.1 | EMBL:BT010325 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005654 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0006950 | GO:GO:0006952 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009719 | GO:GO:0009723 | GO:GO:0009737 |
| GO:GO:0009864 | GO:GO:0009873 | GO:GO:0009987 | GO:GO:0010105 | GO:GO:0010200 | GO:GO:0016604 |
| GO:GO:0043565 | GO:GO:0045892 | InterPro:IPR001471 | InterPro:IPR036955 | RefSeq:NP_188139.1 | UniProt:O80340 |
| ProteinID:OAP04510.1 | PFAM:PF00847 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007131 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025034 | PO:PO:0025281 |
| PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31677 | PANTHER:PTHR31677:SF17 | SMART:SM00380 | SUPFAM:SSF54171 |
| UniParc:UPI000000140F | SEG:seg | : | : | : | : |
Description
ERF4Ethylene-responsive transcription factor 4 [Source:UniProtKB/Swiss-Prot;Acc:O80340]
Coordinates
chr3:+:5121303..5122562
Molecular Weight (calculated)
23742.1 Da
IEP (calculated)
9.157
GRAVY (calculated)
-0.483
Length
222 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKMGLKPDP ATTNQTHNNA KEIRYRGVRK RPWGRYAAEI RDPGKKTRVW LGTFDTAEEA ARAYDTAARD FRGAKAKTNF PTFLELSDQK VPTGFARSPS
101: QSSTLDCASP PTLVVPSATA GNVPPQLELS LGGGGGGSCY QIPMSRPVYF LDLMGIGNVG RGQPPPVTSA FRSPVVHVAT KMACGAQSDS DSSSVVDFEG
201: GMEKRSQLLD LDLNLPPPSE QA
101: QSSTLDCASP PTLVVPSATA GNVPPQLELS LGGGGGGSCY QIPMSRPVYF LDLMGIGNVG RGQPPPVTSA FRSPVVHVAT KMACGAQSDS DSSSVVDFEG
201: GMEKRSQLLD LDLNLPPPSE QA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.