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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid, nucleus

Predictor Summary:
  • nucleus 5
  • plastid 2
  • mitochondrion 4
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX90146 Canola nucleus 60.78 72.09
Bra010880.1-P Field mustard nucleus 60.78 72.09
CDY15673 Canola nucleus 59.31 72.02
CDY69368 Canola nucleus 60.29 71.51
CDY70175 Canola nucleus 58.82 71.43
Bra030095.1-P Field mustard nucleus 58.82 71.43
Bra032900.1-P Field mustard nucleus 51.47 66.46
CDY34105 Canola nucleus 50.98 65.82
CDY70796 Canola nucleus 50.98 64.6
CDY34104 Canola nucleus 50.98 64.2
Bra032901.1-P Field mustard nucleus 50.98 64.2
CDY61906 Canola cytosol 41.18 62.22
GSMUA_Achr7P03640_001 Banana nucleus 38.24 46.99
GSMUA_Achr8P33590_001 Banana nucleus 40.2 43.85
VIT_19s0014g02240.t01 Wine grape nucleus 46.57 43.18
AT1G53170.1 Thale cress nucleus 37.75 41.62
GSMUA_AchrUn_... Banana nucleus 35.78 41.24
GSMUA_Achr1P25890_001 Banana nucleus 30.88 39.62
AT3G15210.1 Thale cress nucleus 42.16 38.74
GSMUA_Achr5P26850_001 Banana nucleus 35.78 38.22
AT5G44210.1 Thale cress nucleus 35.78 36.5
TraesCS2A01G427700.1 Wheat nucleus 37.25 36.19
Zm00001d002364_P001 Maize nucleus, plastid 38.73 35.59
Os04t0610400-01 Rice nucleus 38.24 35.14
Zm00001d026271_P001 Maize nucleus, plastid 38.24 35.14
TraesCS2D01G425700.1 Wheat nucleus 37.25 35.02
Zm00001d024324_P001 Maize nucleus 31.86 34.95
TraesCS2B01G448100.1 Wheat nucleus 36.76 34.25
EES11400 Sorghum nucleus 38.24 33.77
EES14715 Sorghum nucleus 35.29 33.03
Zm00001d049364_P001 Maize nucleus, plastid 32.84 33.0
AT1G28360.1 Thale cress nucleus 30.39 32.8
AT1G50640.1 Thale cress mitochondrion, nucleus 35.29 32.0
EES14716 Sorghum plastid 32.84 31.9
EES14717 Sorghum nucleus 31.86 30.37
OQU80085 Sorghum plastid 33.82 30.0
AT3G20310.1 Thale cress nucleus 33.82 28.28
HORVU2Hr1G099890.2 Barley nucleus 28.43 26.73
AT1G03800.1 Thale cress nucleus 31.37 26.12
AT5G13910.1 Thale cress nucleus 25.0 24.17
AT1G12890.1 Thale cress nucleus 23.04 21.46
AT1G28160.1 Thale cress nucleus 24.51 20.41
AT1G12980.1 Thale cress nucleus 27.94 17.38
AT1G24590.1 Thale cress nucleus 25.49 16.99
AT5G18560.1 Thale cress nucleus 25.49 14.94
Protein Annotations
MapMan:15.5.7.1Gene3D:3.30.730.10EntrezGene:839733UniProt:A0A1P8AP34ProteinID:AAF16756.1ProteinID:AEE30963.1
EMBL:AF360232ProteinID:ANM58405.1InterPro:AP2/ERF_domInterPro:AP2/ERF_dom_sfArrayExpress:AT1G28370EnsemblPlantsGene:AT1G28370
RefSeq:AT1G28370TAIR:AT1G28370RefSeq:AT1G28370-TAIR-GEnsemblPlants:AT1G28370.2EMBL:AY040032EMBL:AY086783
ProteinID:BAB62911.1InterPro:DNA-bd_dom_sfSymbol:ERF11GO:GO:0003674GO:GO:0003676GO:GO:0003677
GO:GO:0003700GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634
GO:GO:0006139GO:GO:0006351GO:GO:0006355GO:GO:0007154GO:GO:0007165GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009719GO:GO:0009873GO:GO:0009987GO:GO:0010087
GO:GO:0051301InterPro:IPR001471InterPro:IPR036955RefSeq:NP_001319098.1RefSeq:NP_174159.2ProteinID:OAP15266.1
PFAM:PF00847PRINTS:PR00367PFscan:PS51032PANTHER:PTHR31190SMART:SM00380SUPFAM:SSF54171
UniParc:UPI00000A501BSEG:seg::::
Description
ERF11ERF domain protein 11 [Source:TAIR;Acc:AT1G28370]
Coordinates
chr1:-:9955816..9956980
Molecular Weight (calculated)
23214.9 Da
IEP (calculated)
10.462
GRAVY (calculated)
-0.391
Length
204 amino acids
Sequence
(BLAST)
001: MMSSQTSSHN KLIKLPQRFF FLHKQFFLHK QILLFVVVMA PTVKTAAVKT NEGNGVRYRG VRKRPWGRYA AEIRDPFKKS RVWLGTFDTP EEAARAYDKR
101: AIEFRGAKAK TNFPCYNINA HCLSLTQSLS QSSTVESSFP NLNLGSDSVS SRFPFPKIQV KAGMMVFDER SESDSSSVVM DVVRYEGRRV VLDLDLNFPP
201: PPEN
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.