Factsheet for Bra032900.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY34105	Canola	nucleus	97.47	97.47
CDY61906	Canola	cytosol	79.11	92.59
Bra032901.1-P	Field mustard	nucleus	72.15	70.37
Bra010880.1-P	Field mustard	nucleus	73.42	67.44
Bra030095.1-P	Field mustard	nucleus	70.89	66.67
AT1G28370.2	Thale cress	mitochondrion, nucleus, plastid	66.46	51.47
GSMUA_Achr7P03640_001	Banana	nucleus	44.94	42.77
GSMUA_Achr8P33590_001	Banana	nucleus	48.1	40.64
Bra027270.1-P	Field mustard	nucleus	40.51	40.0
Bra030957.1-P	Field mustard	nucleus	46.84	39.15
VIT_19s0014g02240.t01	Wine grape	nucleus	53.16	38.18
GSMUA_Achr1P25890_001	Banana	nucleus	37.97	37.74
Bra015266.1-P	Field mustard	nucleus	43.67	37.7
Bra039658.1-P	Field mustard	nucleus	41.77	37.5
GSMUA_AchrUn_...	Banana	nucleus	41.77	37.29
Bra036016.1-P	Field mustard	nucleus	44.94	36.79
TraesCS2A01G427700.1	Wheat	nucleus	48.1	36.19
Bra018864.1-P	Field mustard	nucleus	46.2	35.96
Zm00001d002364_P001	Maize	nucleus, plastid	50.0	35.59
Zm00001d026271_P001	Maize	nucleus, plastid	50.0	35.59
Zm00001d024324_P001	Maize	nucleus	41.77	35.48
TraesCS2B01G448100.1	Wheat	nucleus	48.73	35.16
GSMUA_Achr5P26850_001	Banana	nucleus	42.41	35.08
TraesCS2D01G425700.1	Wheat	nucleus	48.1	35.02
Os04t0610400-01	Rice	nucleus	48.73	34.68
Bra001588.1-P	Field mustard	nucleus	46.2	34.6
Bra021594.1-P	Field mustard	nucleus	46.2	34.27
EES11400	Sorghum	nucleus	50.0	34.2
Bra038107.1-P	Field mustard	nucleus	42.41	33.5
Bra030094.1-P	Field mustard	nucleus	37.34	33.15
Bra032898.1-P	Field mustard	nucleus	37.34	32.6
Bra001784.1-P	Field mustard	nucleus	44.3	32.56
Bra006325.1-P	Field mustard	nucleus	39.24	31.63
Zm00001d049364_P001	Maize	nucleus, plastid	40.51	31.53
Bra010881.1-P	Field mustard	nucleus	36.71	31.52
EES14716	Sorghum	plastid	41.77	31.43
Bra038261.1-P	Field mustard	nucleus	44.3	31.25
Bra035792.1-P	Field mustard	mitochondrion, nucleus	44.3	31.11
Bra003701.1-P	Field mustard	nucleus	37.97	30.77
EES14715	Sorghum	nucleus	41.77	30.28
EES14717	Sorghum	nucleus	40.51	29.91
OQU80085	Sorghum	plastid	43.04	29.57
HORVU2Hr1G099890.2	Barley	nucleus	37.97	27.65
Bra006222.1-P	Field mustard	nucleus	29.75	22.27
Bra010901.1-P	Field mustard	nucleus	31.65	21.37
Bra026949.1-P	Field mustard	nucleus	29.11	20.81
Bra030076.1-P	Field mustard	nucleus	31.65	20.75
Bra026942.1-P	Field mustard	nucleus	34.81	18.71
Bra010972.1-P	Field mustard	nucleus	34.81	18.27
Bra012499.1-P	Field mustard	nucleus	32.91	17.63
Bra019801.1-P	Field mustard	nucleus	35.44	17.23
Bra002168.1-P	Field mustard	nucleus, plastid	32.28	16.09
Bra006466.1-P	Field mustard	nucleus, plastid	31.01	15.81
Bra023684.1-P	Field mustard	nucleus, plastid	30.38	15.34
Bra008793.1-P	Field mustard	nucleus	29.11	14.33
Bra023440.1-P	Field mustard	nucleus	29.75	13.95
Bra032881.1-P	Field mustard	nucleus	6.33	6.94

Protein Annotations

Gene3D:3.30.730.10	MapMan:35.1	InterPro:AP2/ERF-transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	EnsemblPlantsGene:Bra032900
EnsemblPlants:Bra032900.1	EnsemblPlants:Bra032900.1-P	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	UniProt:M4EVR7	PFAM:PF00847	PIRSF:PIRSF038123
PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31190	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI00025424A8
SEG:seg	:	:	:	:	:

Description

AT1G28370 (E=1e-029) ERF11, ATERF11 | ERF11 (ERF DOMAIN PROTEIN 11); DNA binding / transcription factor/ transcription repressor

Coordinates

chrA09:+:11966509..11966985

Molecular Weight (calculated)

17343.4 Da

IEP (calculated)

10.766

GRAVY (calculated)

-0.766

Length

158 amino acids

Sequence
(BLAST)

001: MAPPTTGKTA AVKTNNSDGG KKENRYRGVR KRPRGRYAAE IRDPVQKARV WLGTFDTSEA AARAYDKAAV AFRGAKAQTN FPRPSLVDNE SPNQSSTVGS
101: SSTITNLNLD TRFPFPKIQV KSGMMVIEES SVVMDRSPQK PSRVPLDFDL NFPPTPDN

Best Arabidopsis Sequence Match ( AT1G28370.2 )
(BLAST)

001: MMSSQTSSHN KLIKLPQRFF FLHKQFFLHK QILLFVVVMA PTVKTAAVKT NEGNGVRYRG VRKRPWGRYA AEIRDPFKKS RVWLGTFDTP EEAARAYDKR
101: AIEFRGAKAK TNFPCYNINA HCLSLTQSLS QSSTVESSFP NLNLGSDSVS SRFPFPKIQV KAGMMVFDER SESDSSSVVM DVVRYEGRRV VLDLDLNFPP
201: PPEN

Arabidopsis Description

ERF11ERF domain protein 11 [Source:TAIR;Acc:AT1G28370]
SUBAcon: [mitochondrion,plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.