Factsheet for GSMUA_Achr8P33590_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P03640_001	Banana	nucleus	65.78	74.1
GSMUA_AchrUn_...	Banana	nucleus	64.17	67.8
GSMUA_Achr1P25890_001	Banana	nucleus	55.08	64.78
GSMUA_Achr7P00350_001	Banana	nucleus	34.76	59.09
Bra030095.1-P	Field mustard	nucleus	45.99	51.19
CDY15673	Canola	nucleus	45.99	51.19
CDY70175	Canola	nucleus	45.99	51.19
KRH26242	Soybean	nucleus	34.76	50.39
Bra010880.1-P	Field mustard	nucleus	45.99	50.0
GSMUA_AchrUn_...	Banana	nucleus	28.88	50.0
CDY69368	Canola	nucleus	45.99	50.0
CDX90146	Canola	nucleus	45.99	50.0
CDY70796	Canola	nucleus	42.78	49.69
Bra032901.1-P	Field mustard	nucleus	42.78	49.38
CDY34104	Canola	nucleus	42.78	49.38
KRH55195	Soybean	nucleus	48.13	49.18
Bra032900.1-P	Field mustard	nucleus	40.64	48.1
CDY34105	Canola	nucleus	39.57	46.84
GSMUA_Achr3P13010_001	Banana	nucleus	37.97	46.41
TraesCS2A01G427700.1	Wheat	nucleus	51.87	46.19
Os04t0610400-01	Rice	nucleus	54.55	45.95
TraesCS2D01G425700.1	Wheat	nucleus	51.34	44.24
TraesCS2B01G448100.1	Wheat	nucleus	51.34	43.84
KRH27281	Soybean	nucleus	44.92	43.52
KRH22040	Soybean	nucleus	44.92	43.52
GSMUA_Achr8P06870_001	Banana	nucleus	42.78	43.24
Zm00001d026271_P001	Maize	nucleus, plastid	51.34	43.24
GSMUA_Achr4P06170_001	Banana	nucleus	41.71	42.16
EES11400	Sorghum	nucleus	51.87	41.99
Zm00001d002364_P001	Maize	nucleus, plastid	49.73	41.89
GSMUA_Achr4P04060_001	Banana	mitochondrion	35.29	41.77
GSMUA_Achr8P15830_001	Banana	nucleus	44.38	41.71
CDY61906	Canola	cytosol	29.95	41.48
VIT_19s0014g02240.t01	Wine grape	nucleus	48.66	41.36
AT1G28370.2	Thale cress	mitochondrion, nucleus, plastid	43.85	40.2
Zm00001d049364_P001	Maize	nucleus, plastid	43.32	39.9
GSMUA_Achr5P26850_001	Banana	nucleus	40.64	39.79
Zm00001d024324_P001	Maize	nucleus	39.57	39.78
GSMUA_Achr8P15820_001	Banana	nucleus	35.83	39.41
GSMUA_Achr3P23710_001	Banana	nucleus	42.25	39.11
GSMUA_Achr9P11480_001	Banana	nucleus	47.06	38.94
EES14716	Sorghum	plastid	43.32	38.57
EES14715	Sorghum	nucleus	44.92	38.53
GSMUA_Achr6P00250_001	Banana	nucleus	48.66	38.08
GSMUA_Achr3P29290_001	Banana	nucleus	31.55	37.11
GSMUA_Achr8P03550_001	Banana	nucleus	42.78	37.04
GSMUA_Achr6P00240_001	Banana	nucleus	33.69	36.63
EES14717	Sorghum	nucleus	41.71	36.45
GSMUA_Achr1P18230_001	Banana	nucleus	36.9	36.32
HORVU2Hr1G099890.2	Barley	nucleus	41.18	35.48
GSMUA_Achr4P11430_001	Banana	nucleus	31.02	35.37
OQU80085	Sorghum	plastid	43.32	35.22
GSMUA_Achr10P...	Banana	nucleus	41.71	35.14
GSMUA_Achr4P23620_001	Banana	nucleus	41.71	34.82
GSMUA_Achr6P01440_001	Banana	nucleus	34.22	34.41
GSMUA_Achr6P35320_001	Banana	nucleus	25.67	33.57
GSMUA_Achr4P06660_001	Banana	nucleus	34.22	33.33
GSMUA_Achr7P17910_001	Banana	nucleus	25.67	29.63
GSMUA_Achr4P33270_001	Banana	nucleus	41.71	29.32
GSMUA_Achr5P09940_001	Banana	mitochondrion	35.83	28.15
GSMUA_Achr3P19420_001	Banana	nucleus	37.43	24.65
GSMUA_Achr3P02360_001	Banana	nucleus	33.69	23.42
GSMUA_Achr10P...	Banana	nucleus	32.62	23.37
GSMUA_Achr8P30180_001	Banana	nucleus	31.02	18.59
GSMUA_AchrUn_...	Banana	nucleus	27.81	18.57
GSMUA_Achr9P01870_001	Banana	nucleus	28.34	18.4

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr8G33590_001	EnsemblPlants:GSMUA_Achr8P33590_001	EnsemblPlants:GSMUA_Achr8T33590_001
InterPro:IPR001471	InterPro:IPR036955	UniProt:M0TVW1	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR31677	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000296AD79	SEG:seg	:

Description

Putative Ethylene-responsive transcription factor 4 [Source:GMGC_GENE;Acc:GSMUA_Achr8G33590_001]

Coordinates

chr8:-:34598151..34599017

Molecular Weight (calculated)

19482.9 Da

IEP (calculated)

9.109

GRAVY (calculated)

-0.451

Length

187 amino acids

Sequence
(BLAST)

001: MAPRVKAANG RDGCGGGGGG EWKGARYRGV RQRPWGRYAA EIRDPAKKCR VWLGTFDTAE EAARAYDTAA RRFRGPKAKT NFPCPLDPLG SAPAAPAAVT
101: IAAVHGAGAA ACSSPSVSTV ESSTPSRKPA ALDLEFRHPP ARDLRAPVCG GVESDSDSSS VVDCPGTPTG RIRFELDLNL PPPSEVA

Best Arabidopsis Sequence Match ( AT5G44210.1 )
(BLAST)

001: MAPRQANGRS IAVSEGGGGK TMTMTTMRKE VHFRGVRKRP WGRYAAEIRD PGKKTRVWLG TFDTAEEAAR AYDTAAREFR GSKAKTNFPL PGESTTVNDG
101: GENDSYVNRT TVTTAREMTR QRFPFACHRE RKVVGGYASA GFFFDPSRAA SLRAELSRVC PVRFDPVNIE LSIGIRETVK VEPRRELNLD LNLAPPVVDV

Arabidopsis Description

ERF9Ethylene-responsive transcription factor 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9FE67]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.