Factsheet for GSMUA_Achr5P09940_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
nucleus 3
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P01440_001	Banana	nucleus	50.0	63.98
GSMUA_Achr7P00350_001	Banana	nucleus	26.89	58.18
GSMUA_AchrUn_...	Banana	nucleus	24.79	54.63
GSMUA_Achr4P06660_001	Banana	nucleus	39.08	48.44
GSMUA_Achr3P29290_001	Banana	nucleus	29.83	44.65
GSMUA_Achr3P13010_001	Banana	nucleus	27.31	42.48
GSMUA_Achr7P03640_001	Banana	nucleus	28.57	40.96
VIT_14s0081g00520.t01	Wine grape	nucleus	29.41	40.94
GSMUA_Achr8P15830_001	Banana	nucleus	33.61	40.2
KRH67315	Soybean	nucleus	27.73	38.37
GSMUA_Achr4P04060_001	Banana	mitochondrion	25.21	37.97
GSMUA_Achr8P06870_001	Banana	nucleus	28.99	37.3
GSMUA_Achr6P00240_001	Banana	nucleus	26.89	37.21
GSMUA_Achr1P25890_001	Banana	nucleus	24.79	37.11
GSMUA_Achr4P06170_001	Banana	nucleus	28.57	36.76
GSMUA_Achr8P15820_001	Banana	nucleus	25.63	35.88
GSMUA_Achr8P33590_001	Banana	nucleus	28.15	35.83
GSMUA_Achr5P26850_001	Banana	nucleus	28.57	35.6
GSMUA_AchrUn_...	Banana	nucleus	26.47	35.59
GSMUA_Achr4P11430_001	Banana	nucleus	23.95	34.76
GSMUA_Achr1P18230_001	Banana	nucleus	27.73	34.74
GSMUA_Achr6P35320_001	Banana	nucleus	20.17	33.57
GSMUA_Achr9P11480_001	Banana	nucleus	31.51	33.19
GSMUA_Achr3P23710_001	Banana	nucleus	28.15	33.17
GSMUA_Achr4P23620_001	Banana	nucleus	30.25	32.14
GSMUA_Achr8P03550_001	Banana	nucleus	28.57	31.48
GSMUA_Achr6P00250_001	Banana	nucleus	30.67	30.54
GSMUA_Achr7P17910_001	Banana	nucleus	20.59	30.25
GSMUA_Achr10P...	Banana	nucleus	26.47	28.38
GSMUA_Achr4P33270_001	Banana	nucleus	27.73	24.81
GSMUA_Achr3P19420_001	Banana	nucleus	26.47	22.18
GSMUA_Achr3P02360_001	Banana	nucleus	23.11	20.45
GSMUA_Achr10P...	Banana	nucleus	21.85	19.92
GSMUA_AchrUn_...	Banana	nucleus	21.01	17.86
GSMUA_Achr9P01870_001	Banana	nucleus	21.01	17.36
GSMUA_Achr8P30180_001	Banana	nucleus	22.27	16.99

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr5G09940_001	EnsemblPlants:GSMUA_Achr5P09940_001	EnsemblPlants:GSMUA_Achr5T09940_001
InterPro:IPR001471	InterPro:IPR036955	UniProt:M0SX73	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR31190	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000296DF13	SEG:seg	:

Description

Putative Ethylene-responsive transcription factor 9 [Source:GMGC_GENE;Acc:GSMUA_Achr5G09940_001]

Coordinates

chr5:-:7114240..7114956

Molecular Weight (calculated)

26627.0 Da

IEP (calculated)

11.047

GRAVY (calculated)

-0.457

Length

238 amino acids

Sequence
(BLAST)

001: MRLPSGKRNQ WYYIKSRSGG CWVRPRPPVA VYIYITFPFA PSRTKPRYVL VMAVETIPTR NAGSATVAVT GSKEAALTMG GGRKASHFRG VRKRPWGRFA
101: AEIRDPWKKT RKWLGTFDTA EEAARAYDEA ARSLRGPKAK TNFGNSVPVV EILPSAAASA VPAPQISWSL APPWRSGFLA LAPAPNGQDM FLGWQSNQSK
201: YSWYRFEAVK MVVSEQEEAK KKKKKSFDFD LNLPPPFI

Best Arabidopsis Sequence Match ( AT5G44210.1 )
(BLAST)

001: MAPRQANGRS IAVSEGGGGK TMTMTTMRKE VHFRGVRKRP WGRYAAEIRD PGKKTRVWLG TFDTAEEAAR AYDTAAREFR GSKAKTNFPL PGESTTVNDG
101: GENDSYVNRT TVTTAREMTR QRFPFACHRE RKVVGGYASA GFFFDPSRAA SLRAELSRVC PVRFDPVNIE LSIGIRETVK VEPRRELNLD LNLAPPVVDV

Arabidopsis Description

ERF9Ethylene-responsive transcription factor 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9FE67]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.