CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d049364_P001	Maize	nucleus, plastid	66.96	75.86
EES14715	Sorghum	nucleus	71.74	75.69
EES14716	Sorghum	plastid	63.48	69.52
EES14717	Sorghum	nucleus	49.57	53.27
Bra030095.1-P	Field mustard	nucleus	31.74	43.45
CDY15673	Canola	nucleus	31.74	43.45
CDY70175	Canola	nucleus	31.74	43.45
GSMUA_Achr8P33590_001	Banana	nucleus	35.22	43.32
Bra032900.1-P	Field mustard	nucleus	29.57	43.04
EES11400	Sorghum	nucleus	43.04	42.86
KRH26242	Soybean	nucleus	23.91	42.64
Bra010880.1-P	Field mustard	nucleus	31.74	42.44
CDX90146	Canola	nucleus	31.74	42.44
CDY34105	Canola	nucleus	29.13	42.41
CDY69368	Canola	nucleus	31.3	41.86
CDY70796	Canola	nucleus	28.7	40.99
KRH55195	Soybean	nucleus	32.17	40.44
Bra032901.1-P	Field mustard	nucleus	28.26	40.12
CDY34104	Canola	nucleus	28.26	40.12
OQU82539	Sorghum	nucleus, plastid	31.3	37.89
VIT_19s0014g02240.t01	Wine grape	nucleus	36.09	37.73
KRH22040	Soybean	nucleus	30.87	36.79
KRH27281	Soybean	nucleus	30.87	36.79
EES01601	Sorghum	nucleus	26.52	34.46
EER88863	Sorghum	nucleus	29.13	34.36
EES19749	Sorghum	nucleus, plastid	37.83	33.85
AT1G28370.2	Thale cress	mitochondrion, nucleus, plastid	30.0	33.82
CDY61906	Canola	cytosol	19.57	33.33
EES06418	Sorghum	nucleus	30.0	32.24
OQU87713	Sorghum	nucleus, plastid	33.04	31.41
KXG24553	Sorghum	nucleus	22.17	29.65
KXG22269	Sorghum	nucleus	23.91	25.7
KXG30301	Sorghum	nucleus, plastid	22.17	18.48
EES05354	Sorghum	nucleus	24.35	18.06
EES10693	Sorghum	plastid	22.17	17.83
KXG36907	Sorghum	nucleus	23.48	16.51

Protein Annotations

Gene3D:3.30.730.10	MapMan:35.2	UniProt:A0A1Z5R9G0	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955
EnsemblPlants:OQU80085	ProteinID:OQU80085	ProteinID:OQU80085.1	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR31677	PANTHER:PTHR31677:SF17	SMART:SM00380	EnsemblPlantsGene:SORBI_3007G077001	SUPFAM:SSF54171	UniParc:UPI000B8B9C0C
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:8904278..8905555

Molecular Weight (calculated)

23468.4 Da

IEP (calculated)

5.281

GRAVY (calculated)

-0.088

Length

230 amino acids

Sequence
(BLAST)

001: MAPKRWTSPS GSSSSSGSGL FAPPRLRGVR KRPWGRYAAE IRDPVTKARV WLGTFDTPEQ AARAYDAAAR RLRGPGATTN YPAAAATEPE PPVAPAPSGS
101: GSASGRSAVA YESPSSSSSS SSSCALPLPL ESLPPPAAVV APPPSLELSL ALPASAAVAA NTYYQLFSDP TPALLQFLPP KSEEELEQSF SGSSSLSSSS
201: SVVFDAAPAS VGLALDLNLA LVPAAETMVV

Best Arabidopsis Sequence Match ( AT3G15210.1 )
(BLAST)

001: MAKMGLKPDP ATTNQTHNNA KEIRYRGVRK RPWGRYAAEI RDPGKKTRVW LGTFDTAEEA ARAYDTAARD FRGAKAKTNF PTFLELSDQK VPTGFARSPS
101: QSSTLDCASP PTLVVPSATA GNVPPQLELS LGGGGGGSCY QIPMSRPVYF LDLMGIGNVG RGQPPPVTSA FRSPVVHVAT KMACGAQSDS DSSSVVDFEG
201: GMEKRSQLLD LDLNLPPPSE QA

Arabidopsis Description

ERF4Ethylene-responsive transcription factor 4 [Source:UniProtKB/Swiss-Prot;Acc:O80340]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.