Factsheet for Bra006466.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 6
plastid 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX88931	Canola	nucleus	99.03	93.31
Bra023684.1-P	Field mustard	nucleus, plastid	86.13	85.3
Bra002168.1-P	Field mustard	nucleus, plastid	82.9	81.07
AT5G18560.1	Thale cress	nucleus	86.77	77.3
Solyc01g067540.1.1	Tomato	nucleus	34.19	33.02
Bra030095.1-P	Field mustard	nucleus	17.74	32.74
Bra006222.1-P	Field mustard	nucleus	21.61	31.75
GSMUA_Achr8P30180_001	Banana	nucleus	31.29	31.09
Zm00001d007119_P001	Maize	nucleus	29.68	31.08
Bra032900.1-P	Field mustard	nucleus	15.81	31.01
TraesCS2D01G118200.1	Wheat	nucleus, plastid	29.35	30.85
Bra010880.1-P	Field mustard	nucleus	17.1	30.81
TraesCS2A01G116900.1	Wheat	nucleus	29.35	30.43
Bra032901.1-P	Field mustard	nucleus	15.81	30.25
PGSC0003DMT400058356	Potato	nucleus	33.23	30.21
Zm00001d022488_P001	Maize	nucleus	30.65	30.16
Bra026949.1-P	Field mustard	nucleus	20.97	29.41
Bra027270.1-P	Field mustard	nucleus	15.16	29.38
TraesCS2B01G136100.1	Wheat	nucleus	29.03	29.32
Os07t0669500-01	Rice	nucleus, plastid	30.0	29.25
KXG36907	Sorghum	nucleus	30.65	29.05
Bra010901.1-P	Field mustard	nucleus	21.29	28.21
Bra030957.1-P	Field mustard	nucleus	17.1	28.04
Bra018864.1-P	Field mustard	nucleus	18.06	27.59
Bra030094.1-P	Field mustard	nucleus	15.81	27.53
Bra001588.1-P	Field mustard	nucleus	18.39	27.01
Bra032898.1-P	Field mustard	nucleus	15.48	26.52
Bra030076.1-P	Field mustard	nucleus	20.32	26.14
Bra039658.1-P	Field mustard	nucleus	14.84	26.14
Bra001784.1-P	Field mustard	nucleus	18.06	26.05
Bra010881.1-P	Field mustard	nucleus	15.16	25.54
Bra036016.1-P	Field mustard	nucleus	15.81	25.39
Bra015266.1-P	Field mustard	nucleus	14.84	25.14
Bra003701.1-P	Field mustard	nucleus	15.81	25.13
Bra021594.1-P	Field mustard	nucleus	17.1	24.88
Bra035792.1-P	Field mustard	mitochondrion, nucleus	17.74	24.44
Bra038261.1-P	Field mustard	nucleus	17.42	24.11
Bra038107.1-P	Field mustard	nucleus	15.16	23.5
Bra026942.1-P	Field mustard	nucleus	21.61	22.79
Bra019801.1-P	Field mustard	nucleus	23.87	22.77
Bra012499.1-P	Field mustard	nucleus	20.97	22.03
Bra006325.1-P	Field mustard	nucleus	13.87	21.94
Bra010972.1-P	Field mustard	nucleus	20.97	21.59
Bra008793.1-P	Field mustard	nucleus	21.61	20.87
Bra023440.1-P	Field mustard	nucleus	21.94	20.18
Bra032881.1-P	Field mustard	nucleus	3.87	8.33

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	EnsemblPlantsGene:Bra006466	EnsemblPlants:Bra006466.1
EnsemblPlants:Bra006466.1-P	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	UniProt:M4CQH7	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR31677	PANTHER:PTHR31677:SF40	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000253FEC5	SEG:seg

Description

AT5G18560 (E=3e-109) PUCHI | PUCHI; DNA binding / transcription factor

Coordinates

chrA03:-:3614087..3615019

Molecular Weight (calculated)

34149.0 Da

IEP (calculated)

7.142

GRAVY (calculated)

-0.724

Length

310 amino acids

Sequence
(BLAST)

001: MGFAIINQNT ANTTTTTTGE RRGRRSKQAE PGRFLGVRRR PWGRYAAEIR DPTTKERHWL GTFDTAHEAA LAYDRAALSM RGTQGRTNFA YTPTDVHTIL
101: TNPNLHSLIV SPYNNNQSFL PNSSPQFVID HHPHYQNYHH HQQPKHIPTA SFKTPVRHQN ADIQAFSSSP QNSSSNGSLS SSLDEEHNFF SFDGSNSSNN
201: SGYLDCIVPN HCLKPPPETT TTQSKTGAGF TTPASKASDS YGGFNNSYFE DGDMMMNHHH EFGSCDLSAM ITNYGAAASV TMKQQDFSSA SSSIAAFGDV
301: ADTTGFYSLY

Best Arabidopsis Sequence Match ( AT5G18560.1 )
(BLAST)

001: MSTSKTLDHN KPFETSQTQM GFALIHQNTS ANTTTTTTTG ERRGRRSKQA EPGRFLGVRR RPWGRYAAEI RDPTTKERHW LGTFDTAHEA ALAYDRAALS
101: MRGTQARTNF VYTPTDVHTI LTNPNLHSLI VSPYNNNQSF LPNSSPQFVI DHHPHYQNYH QPQQPKHTLP QTVLPAASFK TPVRHQSVDI QAFGNSPQNS
201: SSNGSLSSSL DEENNFFFSL TSEEHNKSNN NSGYLDCIVP NHCLKPPPEA TTTQNQAGAS FTTPVASKAS EPYGGFSNSY FEDGEMMMMN HHEFGSCDLS
301: AMITNYGAAA ASMSMEDYGM MEPQDLSSSS IAAFGDVVAD TTGFYSVF

Arabidopsis Description

ERF086PUCHI [Source:UniProtKB/TrEMBL;Acc:A0A178URC3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.