Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra006466.1-P | Field mustard | nucleus, plastid | 93.31 | 99.03 |
| CDX70826 | Canola | nucleus | 95.44 | 94.86 |
| CDY58106 | Canola | nucleus | 86.32 | 85.54 |
| CDY02618 | Canola | nucleus | 85.71 | 84.94 |
| AT5G18560.1 | Thale cress | nucleus | 86.93 | 82.18 |
| CDY13901 | Canola | nucleus | 82.98 | 81.25 |
| CDY68296 | Canola | nucleus | 78.42 | 79.88 |
| Solyc01g067540.1.1 | Tomato | nucleus | 34.04 | 34.89 |
| CDY25733 | Canola | nucleus | 14.29 | 34.06 |
| CDY15673 | Canola | nucleus | 17.02 | 33.33 |
| CDY70175 | Canola | nucleus | 17.02 | 33.33 |
| CDX78545 | Canola | nucleus | 20.67 | 32.08 |
| CDX70526 | Canola | nucleus | 20.67 | 32.08 |
| GSMUA_Achr8P30180_001 | Banana | nucleus | 30.4 | 32.05 |
| PGSC0003DMT400058356 | Potato | nucleus | 33.13 | 31.96 |
| Zm00001d007119_P001 | Maize | nucleus | 28.57 | 31.76 |
| CDY70796 | Canola | nucleus | 15.5 | 31.68 |
| TraesCS2A01G116900.1 | Wheat | nucleus | 28.57 | 31.44 |
| CDX90146 | Canola | nucleus | 16.41 | 31.4 |
| CDY69368 | Canola | nucleus | 16.41 | 31.4 |
| CDY02523 | Canola | nucleus | 16.11 | 31.18 |
| Zm00001d022488_P001 | Maize | nucleus | 29.79 | 31.11 |
| CDY34104 | Canola | nucleus | 15.2 | 30.86 |
| TraesCS2D01G118200.1 | Wheat | nucleus, plastid | 27.66 | 30.85 |
| Os07t0669500-01 | Rice | nucleus, plastid | 29.48 | 30.5 |
| CDY34105 | Canola | nucleus | 14.59 | 30.38 |
| TraesCS2B01G136100.1 | Wheat | nucleus | 28.27 | 30.29 |
| KXG36907 | Sorghum | nucleus | 29.79 | 29.97 |
| CDX90126 | Canola | nucleus | 20.36 | 28.63 |
| CDY11748 | Canola | nucleus | 20.06 | 28.57 |
| CDX94610 | Canola | nucleus | 14.29 | 28.31 |
| CDY22810 | Canola | nucleus | 17.33 | 28.08 |
| CDX97640 | Canola | nucleus | 16.11 | 28.04 |
| CDX75817 | Canola | nucleus | 17.33 | 27.94 |
| CDX82442 | Canola | nucleus | 17.33 | 27.94 |
| CDX98534 | Canola | nucleus | 16.41 | 27.55 |
| CDY15674 | Canola | nucleus | 14.89 | 27.53 |
| CDY37113 | Canola | mitochondrion, nucleus | 17.33 | 27.4 |
| CDY15690 | Canola | nucleus | 19.45 | 26.78 |
| CDX89866 | Canola | nucleus | 14.59 | 26.67 |
| CDX94591 | Canola | nucleus | 19.45 | 26.56 |
| CDY34107 | Canola | nucleus | 14.59 | 26.52 |
| CDX82253 | Canola | nucleus | 17.33 | 26.51 |
| CDY30806 | Canola | nucleus | 14.59 | 26.23 |
| CDY24111 | Canola | nucleus | 13.98 | 26.14 |
| CDY14914 | Canola | nucleus | 15.2 | 25.91 |
| CDX96955 | Canola | nucleus | 15.2 | 25.91 |
| CDY61213 | Canola | nucleus | 13.98 | 25.84 |
| CDY36045 | Canola | nucleus | 17.02 | 25.81 |
| CDY18185 | Canola | nucleus | 13.98 | 25.56 |
| CDX90145 | Canola | nucleus | 14.29 | 25.54 |
| CDY20105 | Canola | nucleus | 16.11 | 25.36 |
| CDY35734 | Canola | nucleus | 13.98 | 24.86 |
| CDY32314 | Canola | nucleus | 16.41 | 24.77 |
| CDY45936 | Canola | nucleus | 14.89 | 24.38 |
| CDY16048 | Canola | nucleus | 20.97 | 23.63 |
| CDY25874 | Canola | nucleus | 14.29 | 23.5 |
| CDY61906 | Canola | cytosol | 9.42 | 22.96 |
| CDY26605 | Canola | nucleus | 20.36 | 22.79 |
| CDY19407 | Canola | nucleus | 21.88 | 22.78 |
| CDY26598 | Canola | nucleus | 13.68 | 22.73 |
| CDY16037 | Canola | nucleus | 13.68 | 22.73 |
| CDY03876 | Canola | nucleus | 20.36 | 22.41 |
| CDY36131 | Canola | nucleus | 20.06 | 22.07 |
| CDY24422 | Canola | nucleus | 20.06 | 22.07 |
| CDY51586 | Canola | nucleus | 19.45 | 21.69 |
| CDY72607 | Canola | nucleus | 20.97 | 21.36 |
| CDX91091 | Canola | nucleus | 20.97 | 20.29 |
| CDX85621 | Canola | nucleus | 20.97 | 20.18 |
| CDX98022 | Canola | nucleus | 8.51 | 14.14 |
| CDY46294 | Canola | nucleus | 4.26 | 9.72 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | GO:A0A078DI74 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | EnsemblPlants:CDX88931 |
| ProteinID:CDX88931 | ProteinID:CDX88931.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00149028001 | InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 |
| PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31677 | PANTHER:PTHR31677:SF40 | SMART:SM00380 | SUPFAM:SSF54171 |
| UniParc:UPI0004EE4BF5 | SEG:seg | : | : | : | : |
Description
BnaA03g07180D
Coordinates
chrLK031856:+:1661820..1662809
Molecular Weight (calculated)
36365.6 Da
IEP (calculated)
7.136
GRAVY (calculated)
-0.750
Length
329 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTSKTLDHI KPYETSQTQM GFAIINQNTA NTTTTTTGER RGRRSKQAEP GRFLGVRRRP WGRYAAEIRD PTTKERHWLG TFDTAHEAAL AYDRAALSMR
101: GTQGRTNFAY TPTDVHTILT NPNLHSLIVS PYNNNQSFLP NSSPQFVIDH HPHYQNYHHH QQPKHIPTAS FKTPVRHQNA DIQAFSSSPQ NSSCNGSLSS
201: SLDEEHNFFS FDGSNSSNNS GYLDCIVPNH CLKPPPETTT TQSKTGAGFT TPASKASDSY GGFNNSYFED GDMMMNQHHE FGSCDLSAMI TNYGAAASMT
301: MKQQDFSSAS SSIAAFGDVA DTTGFYSLY
101: GTQGRTNFAY TPTDVHTILT NPNLHSLIVS PYNNNQSFLP NSSPQFVIDH HPHYQNYHHH QQPKHIPTAS FKTPVRHQNA DIQAFSSSPQ NSSCNGSLSS
201: SLDEEHNFFS FDGSNSSNNS GYLDCIVPNH CLKPPPETTT TQSKTGAGFT TPASKASDSY GGFNNSYFED GDMMMNQHHE FGSCDLSAMI TNYGAAASMT
301: MKQQDFSSAS SSIAAFGDVA DTTGFYSLY
001: MSTSKTLDHN KPFETSQTQM GFALIHQNTS ANTTTTTTTG ERRGRRSKQA EPGRFLGVRR RPWGRYAAEI RDPTTKERHW LGTFDTAHEA ALAYDRAALS
101: MRGTQARTNF VYTPTDVHTI LTNPNLHSLI VSPYNNNQSF LPNSSPQFVI DHHPHYQNYH QPQQPKHTLP QTVLPAASFK TPVRHQSVDI QAFGNSPQNS
201: SSNGSLSSSL DEENNFFFSL TSEEHNKSNN NSGYLDCIVP NHCLKPPPEA TTTQNQAGAS FTTPVASKAS EPYGGFSNSY FEDGEMMMMN HHEFGSCDLS
301: AMITNYGAAA ASMSMEDYGM MEPQDLSSSS IAAFGDVVAD TTGFYSVF
101: MRGTQARTNF VYTPTDVHTI LTNPNLHSLI VSPYNNNQSF LPNSSPQFVI DHHPHYQNYH QPQQPKHTLP QTVLPAASFK TPVRHQSVDI QAFGNSPQNS
201: SSNGSLSSSL DEENNFFFSL TSEEHNKSNN NSGYLDCIVP NHCLKPPPEA TTTQNQAGAS FTTPVASKAS EPYGGFSNSY FEDGEMMMMN HHEFGSCDLS
301: AMITNYGAAA ASMSMEDYGM MEPQDLSSSS IAAFGDVVAD TTGFYSVF
Arabidopsis Description
ERF086PUCHI [Source:UniProtKB/TrEMBL;Acc:A0A178URC3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.