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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • plastid 1
  • cytosol 1
  • mitochondrion 1
PPI

Inferred distinct locusB in Crop

locusBlocations
CDY02297
CDY09572
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra019801.1-P Field mustard nucleus 98.48 60.0
CDY19407 Canola nucleus 87.88 55.06
CDY16048 Canola nucleus 51.01 34.59
CDY26605 Canola nucleus 50.51 34.01
AT1G12980.1 Thale cress nucleus 50.0 30.18
CDY51586 Canola nucleus 18.69 12.54
CDY36131 Canola nucleus 18.69 12.37
CDY24422 Canola nucleus 18.69 12.37
CDY03876 Canola nucleus 18.18 12.04
CDY61906 Canola cytosol 8.08 11.85
CDY15673 Canola nucleus 8.59 10.12
CDY70175 Canola nucleus 8.59 10.12
CDY70796 Canola nucleus 8.08 9.94
CDY34104 Canola nucleus 8.08 9.88
CDY34105 Canola nucleus 7.58 9.49
CDY69368 Canola nucleus 8.08 9.3
CDX90146 Canola nucleus 8.08 9.3
CDY68296 Canola nucleus 14.65 8.98
CDY13901 Canola nucleus 14.65 8.63
GSMUA_AchrUn_... Banana nucleus 12.12 8.57
CDX88931 Canola nucleus 14.14 8.51
GSMUA_Achr9P01870_001 Banana nucleus 12.12 8.33
CDX70826 Canola nucleus 13.64 8.16
CDY02618 Canola nucleus 13.64 8.13
CDY58106 Canola nucleus 13.64 8.13
GSMUA_Achr3P19420_001 Banana nucleus 10.1 7.04
CDX90126 Canola nucleus 8.08 6.84
CDY02523 Canola nucleus 5.56 6.47
CDX97640 Canola nucleus 6.06 6.35
CDY15690 Canola nucleus 7.58 6.28
CDX94591 Canola nucleus 7.58 6.22
CDX98534 Canola nucleus 6.06 6.12
CDY11748 Canola nucleus 7.07 6.06
CDX75817 Canola nucleus 6.06 5.88
CDX82442 Canola nucleus 6.06 5.88
CDY37113 Canola mitochondrion, nucleus 6.06 5.77
CDY26598 Canola nucleus 5.56 5.56
CDY46294 Canola nucleus 4.04 5.56
CDY32314 Canola nucleus 6.06 5.5
CDY22810 Canola nucleus 5.56 5.42
CDY20105 Canola nucleus 5.56 5.26
CDX78545 Canola nucleus 5.56 5.19
CDX82253 Canola nucleus 5.56 5.12
CDY24111 Canola nucleus 4.55 5.11
CDY36045 Canola nucleus 5.56 5.07
CDX89866 Canola nucleus 4.55 5.0
CDY25874 Canola nucleus 5.05 5.0
CDY45936 Canola nucleus 5.05 4.98
CDX70526 Canola nucleus 5.05 4.72
CDY16037 Canola nucleus 4.55 4.55
CDY61213 Canola nucleus 4.04 4.49
CDY18185 Canola nucleus 4.04 4.44
CDY34107 Canola nucleus 4.04 4.42
CDY30806 Canola nucleus 4.04 4.37
CDY14914 Canola nucleus 4.04 4.15
CDX96955 Canola nucleus 4.04 4.15
Os02t0594300-00 Rice nucleus 7.07 4.06
CDY15674 Canola nucleus 3.54 3.93
EES05354 Sorghum nucleus 6.06 3.87
CDX90145 Canola nucleus 3.54 3.8
CDY35734 Canola nucleus 3.54 3.78
Zm00001d050948_P001 Maize nucleus 5.56 3.74
TraesCS6B01G237700.1 Wheat nucleus 5.56 3.69
TraesCS6D01G192200.1 Wheat nucleus 5.56 3.69
TraesCS6A01G208700.1 Wheat nucleus 5.56 3.68
CDY25733 Canola nucleus 2.53 3.62
CDX94610 Canola nucleus 3.03 3.61
CDX91091 Canola nucleus 5.05 2.94
HORVU6Hr1G053460.1 Barley nucleus 2.53 2.82
CDX85621 Canola nucleus 4.55 2.63
CDY72607 Canola nucleus 3.54 2.17
Protein Annotations
EnsemblPlants:CDX98022EnsemblPlantsGene:GSBRNA2T00105386001ProteinID:CDX98022ProteinID:CDX98022.1SEG:segUniParc:UPI0004EEA4DF
MapMan:35.1:::::
Description
BnaA06g07730D
Coordinates
chrLK031902:-:579336..580311
Molecular Weight (calculated)
21775.0 Da
IEP (calculated)
4.859
GRAVY (calculated)
-0.747
Length
198 amino acids
Sequence
(BLAST)
001: MEEALRKFSE STHSLIPGYE PVQYPLTRNF TNTKSSNRKP ASKETRITSL GTGNATTRYR GPKTASVSSS VYDYDTEFFP QESSDSGLLE EVVKEFLKKN
101: RNHPLPPPPP MIGDLESTGG DLSALSNVSD SFFQQTTEPI TWTLEGHGNN NQAGGSGYFN GAIPAADSDF TYGSEAWGYQ EMLMYGGQLG CTYRKPWG
Best Arabidopsis Sequence Match ( AT1G12980.1 )
(BLAST)
001: MEKALRNFTE STHSPDPNPL TKFFTEPTAS PVSRNRKLSS KDTTVTIAGA GSSTTRYRGV RRRPWGRYAA EIRDPMSKER RWLGTFDTAE QAACAYDSAA
101: RAFRGAKART NFTYPTAVIM PEPRFSFSNK KSSPSARCPL PSLPLDSSTQ NFYGAPAAQR IYNTQSIFLR DASCSSRKTT PYNNSFNGSS SSYSASKTAC
201: VSYSENENNE SFFPEESSDT GLLQEVVQEF LKKNRGVPPS PPTPPPVTSH HDNSGYFSNL TIYSENMVQE TKETLSSKLD RYGNFQANDD GVRAVADGGL
301: SLGSNEWGYQ EMLMYGTQLG CTCRRSWG
Arabidopsis Description
ESR1Ethylene-responsive transcription factor ESR1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAD4]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.