Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- cytosol 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT1G12980.1 | CDY02297 | AT1G30490.1 | 17376809 |
AT1G12980.1 | CDY09572 | AT1G30490.1 | 17376809 |
AT1G12980.1 | CDY02297 | AT1G30490.1 | 18830673 |
AT1G12980.1 | CDY09572 | AT1G30490.1 | 18830673 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra019801.1-P | Field mustard | nucleus | 98.48 | 60.0 |
CDY19407 | Canola | nucleus | 87.88 | 55.06 |
CDY16048 | Canola | nucleus | 51.01 | 34.59 |
CDY26605 | Canola | nucleus | 50.51 | 34.01 |
AT1G12980.1 | Thale cress | nucleus | 50.0 | 30.18 |
CDY51586 | Canola | nucleus | 18.69 | 12.54 |
CDY36131 | Canola | nucleus | 18.69 | 12.37 |
CDY24422 | Canola | nucleus | 18.69 | 12.37 |
CDY03876 | Canola | nucleus | 18.18 | 12.04 |
CDY61906 | Canola | cytosol | 8.08 | 11.85 |
CDY15673 | Canola | nucleus | 8.59 | 10.12 |
CDY70175 | Canola | nucleus | 8.59 | 10.12 |
CDY70796 | Canola | nucleus | 8.08 | 9.94 |
CDY34104 | Canola | nucleus | 8.08 | 9.88 |
CDY34105 | Canola | nucleus | 7.58 | 9.49 |
CDY69368 | Canola | nucleus | 8.08 | 9.3 |
CDX90146 | Canola | nucleus | 8.08 | 9.3 |
CDY68296 | Canola | nucleus | 14.65 | 8.98 |
CDY13901 | Canola | nucleus | 14.65 | 8.63 |
GSMUA_AchrUn_... | Banana | nucleus | 12.12 | 8.57 |
CDX88931 | Canola | nucleus | 14.14 | 8.51 |
GSMUA_Achr9P01870_001 | Banana | nucleus | 12.12 | 8.33 |
CDX70826 | Canola | nucleus | 13.64 | 8.16 |
CDY02618 | Canola | nucleus | 13.64 | 8.13 |
CDY58106 | Canola | nucleus | 13.64 | 8.13 |
GSMUA_Achr3P19420_001 | Banana | nucleus | 10.1 | 7.04 |
CDX90126 | Canola | nucleus | 8.08 | 6.84 |
CDY02523 | Canola | nucleus | 5.56 | 6.47 |
CDX97640 | Canola | nucleus | 6.06 | 6.35 |
CDY15690 | Canola | nucleus | 7.58 | 6.28 |
CDX94591 | Canola | nucleus | 7.58 | 6.22 |
CDX98534 | Canola | nucleus | 6.06 | 6.12 |
CDY11748 | Canola | nucleus | 7.07 | 6.06 |
CDX75817 | Canola | nucleus | 6.06 | 5.88 |
CDX82442 | Canola | nucleus | 6.06 | 5.88 |
CDY37113 | Canola | mitochondrion, nucleus | 6.06 | 5.77 |
CDY26598 | Canola | nucleus | 5.56 | 5.56 |
CDY46294 | Canola | nucleus | 4.04 | 5.56 |
CDY32314 | Canola | nucleus | 6.06 | 5.5 |
CDY22810 | Canola | nucleus | 5.56 | 5.42 |
CDY20105 | Canola | nucleus | 5.56 | 5.26 |
CDX78545 | Canola | nucleus | 5.56 | 5.19 |
CDX82253 | Canola | nucleus | 5.56 | 5.12 |
CDY24111 | Canola | nucleus | 4.55 | 5.11 |
CDY36045 | Canola | nucleus | 5.56 | 5.07 |
CDX89866 | Canola | nucleus | 4.55 | 5.0 |
CDY25874 | Canola | nucleus | 5.05 | 5.0 |
CDY45936 | Canola | nucleus | 5.05 | 4.98 |
CDX70526 | Canola | nucleus | 5.05 | 4.72 |
CDY16037 | Canola | nucleus | 4.55 | 4.55 |
CDY61213 | Canola | nucleus | 4.04 | 4.49 |
CDY18185 | Canola | nucleus | 4.04 | 4.44 |
CDY34107 | Canola | nucleus | 4.04 | 4.42 |
CDY30806 | Canola | nucleus | 4.04 | 4.37 |
CDY14914 | Canola | nucleus | 4.04 | 4.15 |
CDX96955 | Canola | nucleus | 4.04 | 4.15 |
Os02t0594300-00 | Rice | nucleus | 7.07 | 4.06 |
CDY15674 | Canola | nucleus | 3.54 | 3.93 |
EES05354 | Sorghum | nucleus | 6.06 | 3.87 |
CDX90145 | Canola | nucleus | 3.54 | 3.8 |
CDY35734 | Canola | nucleus | 3.54 | 3.78 |
Zm00001d050948_P001 | Maize | nucleus | 5.56 | 3.74 |
TraesCS6B01G237700.1 | Wheat | nucleus | 5.56 | 3.69 |
TraesCS6D01G192200.1 | Wheat | nucleus | 5.56 | 3.69 |
TraesCS6A01G208700.1 | Wheat | nucleus | 5.56 | 3.68 |
CDY25733 | Canola | nucleus | 2.53 | 3.62 |
CDX94610 | Canola | nucleus | 3.03 | 3.61 |
CDX91091 | Canola | nucleus | 5.05 | 2.94 |
HORVU6Hr1G053460.1 | Barley | nucleus | 2.53 | 2.82 |
CDX85621 | Canola | nucleus | 4.55 | 2.63 |
CDY72607 | Canola | nucleus | 3.54 | 2.17 |
Protein Annotations
EnsemblPlants:CDX98022 | EnsemblPlantsGene:GSBRNA2T00105386001 | ProteinID:CDX98022 | ProteinID:CDX98022.1 | SEG:seg | UniParc:UPI0004EEA4DF |
MapMan:35.1 | : | : | : | : | : |
Description
BnaA06g07730D
Coordinates
chrLK031902:-:579336..580311
Molecular Weight (calculated)
21775.0 Da
IEP (calculated)
4.859
GRAVY (calculated)
-0.747
Length
198 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEALRKFSE STHSLIPGYE PVQYPLTRNF TNTKSSNRKP ASKETRITSL GTGNATTRYR GPKTASVSSS VYDYDTEFFP QESSDSGLLE EVVKEFLKKN
101: RNHPLPPPPP MIGDLESTGG DLSALSNVSD SFFQQTTEPI TWTLEGHGNN NQAGGSGYFN GAIPAADSDF TYGSEAWGYQ EMLMYGGQLG CTYRKPWG
101: RNHPLPPPPP MIGDLESTGG DLSALSNVSD SFFQQTTEPI TWTLEGHGNN NQAGGSGYFN GAIPAADSDF TYGSEAWGYQ EMLMYGGQLG CTYRKPWG
001: MEKALRNFTE STHSPDPNPL TKFFTEPTAS PVSRNRKLSS KDTTVTIAGA GSSTTRYRGV RRRPWGRYAA EIRDPMSKER RWLGTFDTAE QAACAYDSAA
101: RAFRGAKART NFTYPTAVIM PEPRFSFSNK KSSPSARCPL PSLPLDSSTQ NFYGAPAAQR IYNTQSIFLR DASCSSRKTT PYNNSFNGSS SSYSASKTAC
201: VSYSENENNE SFFPEESSDT GLLQEVVQEF LKKNRGVPPS PPTPPPVTSH HDNSGYFSNL TIYSENMVQE TKETLSSKLD RYGNFQANDD GVRAVADGGL
301: SLGSNEWGYQ EMLMYGTQLG CTCRRSWG
101: RAFRGAKART NFTYPTAVIM PEPRFSFSNK KSSPSARCPL PSLPLDSSTQ NFYGAPAAQR IYNTQSIFLR DASCSSRKTT PYNNSFNGSS SSYSASKTAC
201: VSYSENENNE SFFPEESSDT GLLQEVVQEF LKKNRGVPPS PPTPPPVTSH HDNSGYFSNL TIYSENMVQE TKETLSSKLD RYGNFQANDD GVRAVADGGL
301: SLGSNEWGYQ EMLMYGTQLG CTCRRSWG
Arabidopsis Description
ESR1Ethylene-responsive transcription factor ESR1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAD4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.