Factsheet for Bra012499.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra032394.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G24590.1	Bra032394.1-P	AT1G30490.1	17376809

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51586	Canola	nucleus	97.97	97.97
CDY03876	Canola	nucleus	97.29	95.99
Bra010972.1-P	Field mustard	nucleus	82.71	81.06
AT1G24590.1	Thale cress	nucleus	83.05	80.07
PGSC0003DMT400008830	Potato	nucleus	28.47	33.07
PGSC0003DMT400011492	Potato	nucleus	28.47	33.07
Bra032900.1-P	Field mustard	nucleus	17.63	32.91
Bra032901.1-P	Field mustard	nucleus	17.63	32.1
Bra027270.1-P	Field mustard	nucleus	17.29	31.88
Bra010880.1-P	Field mustard	nucleus	18.31	31.4
Bra006222.1-P	Field mustard	nucleus	22.37	31.28
Bra026942.1-P	Field mustard	nucleus	30.85	30.95
Bra030095.1-P	Field mustard	nucleus	17.29	30.36
KRG99434	Soybean	nucleus	34.58	28.81
KRH45585	Soybean	nucleus	34.24	28.53
Bra030957.1-P	Field mustard	nucleus	17.97	28.04
Bra039658.1-P	Field mustard	nucleus	16.61	27.84
Bra019801.1-P	Field mustard	nucleus	30.51	27.69
Bra032898.1-P	Field mustard	nucleus	16.95	27.62
KRH74517	Soybean	nucleus	33.9	27.55
Bra030094.1-P	Field mustard	nucleus	16.61	27.53
Bra036016.1-P	Field mustard	nucleus	17.63	26.94
KRH69639	Soybean	nucleus	35.25	26.6
VIT_00s0291g00030.t01	Wine grape	nucleus	36.95	26.33
Bra015266.1-P	Field mustard	nucleus	16.27	26.23
Solyc05g013540.1.1	Tomato	nucleus	34.24	26.17
Bra010881.1-P	Field mustard	nucleus	16.27	26.09
Bra010901.1-P	Field mustard	nucleus	20.68	26.07
Bra001588.1-P	Field mustard	nucleus	18.64	26.07
PGSC0003DMT400047887	Potato	nucleus	34.24	25.9
Bra021594.1-P	Field mustard	nucleus	18.64	25.82
Bra026949.1-P	Field mustard	nucleus	19.32	25.79
Bra003701.1-P	Field mustard	nucleus	16.95	25.64
Bra001784.1-P	Field mustard	nucleus	18.64	25.58
Bra030076.1-P	Field mustard	nucleus	20.68	25.31
Bra018864.1-P	Field mustard	nucleus	17.29	25.12
Bra035792.1-P	Field mustard	mitochondrion, nucleus	18.64	24.44
Bra038107.1-P	Field mustard	nucleus	16.27	24.0
Bra006325.1-P	Field mustard	nucleus	15.25	22.96
Bra038261.1-P	Field mustard	nucleus	17.29	22.77
Bra002168.1-P	Field mustard	nucleus, plastid	23.05	21.45
Bra006466.1-P	Field mustard	nucleus, plastid	22.03	20.97
Bra023684.1-P	Field mustard	nucleus, plastid	22.03	20.77
Bra008793.1-P	Field mustard	nucleus	21.02	19.31
Bra023440.1-P	Field mustard	nucleus	21.69	18.99
Bra032881.1-P	Field mustard	nucleus	2.71	5.56

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	EnsemblPlantsGene:Bra012499	EnsemblPlants:Bra012499.1
EnsemblPlants:Bra012499.1-P	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	UniProt:M4D7N9	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR31677	PANTHER:PTHR31677:SF9	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI0002541238	SEG:seg

Description

AT1G24590 (E=5e-110) DRNL, DRN-LIKE, SOB2, ESR2 | DRNL (DORNROSCHEN-LIKE); DNA binding / transcription factor

Coordinates

chrA07:-:7175270..7176157

Molecular Weight (calculated)

32592.2 Da

IEP (calculated)

7.109

GRAVY (calculated)

-0.570

Length

295 amino acids

Sequence
(BLAST)

001: MDEAIMRLEG AEHRETNNHS LKRKPSRTSS TAPCSPGGVP TAKSVPGAGA SGGTTIRYRG VRRRPWGRYA AEIRDPMSKE RRWLGTFDTA EEAACAYDCA
101: ARAMRGHKAR TNFVYPIPSL DSYHHRIFSS PPMNMFLRGD VLNSQSLSPF AYPLSNVSGP VYDSFANVND VSEDHSPKAK RFSTFDNESM ISILEPEPAG
201: SGLLQEIVQG FLPKPIPQQA ATPPTTIGVF PTMLETGFQS EFRLPDHVNV EGNGFGQLKY HGELGWVDHE GGFDSAKMHQ NGNAGMLYQY CFHDY

Best Arabidopsis Sequence Match ( AT1G24590.1 )
(BLAST)

001: MEEAIMRLEG AEHRETNIHS LKRKPSRTSS TAPGSPGGVT TAKAASGAGA SGVSTIRYRG VRRRPWGRYA AEIRDPLSKE RRWLGTFDTA EEAACAYDCA
101: ARAMRGLKAR TNFVYPMPSL DSYHHRIFSS PPMNMFLLRD VLNSQSLSPL TTFAYPPCNL SNVNDVVHES FTNVNDVCED LSPKAKRSST IENESLISNI
201: FEPEPASSGL LQEIVQGFLP KPISQHASIP PKSNQQSVGV FPTMPESGFQ TDVRLADFHV EGNGFGQVKY HGELGWADHE NGFDSAKMQQ NGNGGMFYQY
301: CFHDDY

Arabidopsis Description

ESR2Ethylene-responsive transcription factor ESR2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYK5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.