Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY15674 | Canola | nucleus | 75.66 | 80.34 |
| Bra030094.1-P | Field mustard | nucleus | 75.66 | 80.34 |
| CDY35734 | Canola | nucleus | 78.31 | 80.0 |
| CDY30806 | Canola | nucleus | 77.25 | 79.78 |
| CDX90145 | Canola | nucleus | 77.25 | 79.35 |
| Bra010881.1-P | Field mustard | nucleus | 77.25 | 79.35 |
| CDX94610 | Canola | nucleus | 68.78 | 78.31 |
| Bra032898.1-P | Field mustard | nucleus | 74.6 | 77.9 |
| CDY34107 | Canola | nucleus | 74.07 | 77.35 |
| VIT_10s0003g00130.t01 | Wine grape | nucleus | 49.21 | 61.18 |
| KRH21385 | Soybean | nucleus | 51.32 | 59.51 |
| Solyc02g077840.1.1 | Tomato | nucleus | 47.09 | 57.79 |
| PGSC0003DMT400076408 | Potato | nucleus | 46.56 | 57.52 |
| KRH10926 | Soybean | nucleus | 49.74 | 54.65 |
| GSMUA_Achr8P15820_001 | Banana | nucleus | 39.68 | 44.12 |
| Zm00001d012584_P001 | Maize | nucleus | 35.98 | 41.21 |
| TraesCS3A01G328100.1 | Wheat | nucleus | 35.98 | 39.31 |
| TraesCS3D01G321700.1 | Wheat | nucleus | 35.98 | 39.31 |
| TraesCS3B01G357600.1 | Wheat | nucleus | 35.98 | 39.08 |
| EES01601 | Sorghum | nucleus | 35.45 | 37.85 |
| Zm00001d043204_P001 | Maize | nucleus | 36.51 | 37.1 |
| AT1G53170.1 | Thale cress | nucleus | 33.86 | 34.59 |
| Os05t0497200-01 | Rice | nucleus | 34.39 | 34.39 |
| TraesCS1B01G326500.1 | Wheat | nucleus | 31.75 | 32.61 |
| TraesCS1D01G314700.1 | Wheat | nucleus | 31.75 | 32.61 |
| HORVU1Hr1G067160.1 | Barley | nucleus | 32.8 | 32.29 |
| TraesCS1A01G314200.1 | Wheat | nucleus | 31.75 | 31.91 |
| AT3G15210.1 | Thale cress | nucleus | 37.04 | 31.53 |
| AT5G44210.1 | Thale cress | nucleus | 33.33 | 31.5 |
| AT1G28370.2 | Thale cress | mitochondrion, nucleus, plastid | 32.8 | 30.39 |
| AT1G50640.1 | Thale cress | mitochondrion, nucleus | 35.98 | 30.22 |
| Zm00001d010676_P001 | Maize | nucleus | 32.28 | 29.76 |
| Zm00001d038584_P001 | Maize | nucleus | 31.75 | 28.57 |
| AT3G20310.1 | Thale cress | nucleus | 36.51 | 28.28 |
| KXG22269 | Sorghum | nucleus | 31.22 | 27.57 |
| AT5G13910.1 | Thale cress | nucleus | 24.87 | 22.27 |
| AT1G03800.1 | Thale cress | nucleus | 28.04 | 21.63 |
| AT1G28160.1 | Thale cress | nucleus | 26.45 | 20.41 |
| AT1G12890.1 | Thale cress | nucleus | 22.75 | 19.63 |
| AT1G24590.1 | Thale cress | nucleus | 25.93 | 16.01 |
| AT1G12980.1 | Thale cress | nucleus | 26.45 | 15.24 |
| AT5G18560.1 | Thale cress | nucleus | 25.4 | 13.79 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | EntrezGene:839732 | UniProt:A0A178WCW0 | ProteinID:AAF16760.1 | ProteinID:AEE30962.1 |
| InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | ArrayExpress:AT1G28360 | EnsemblPlantsGene:AT1G28360 | RefSeq:AT1G28360 | TAIR:AT1G28360 |
| RefSeq:AT1G28360-TAIR-G | EnsemblPlants:AT1G28360.1 | TAIR:AT1G28360.1 | EMBL:AY099798 | ProteinID:BAB62912.1 | EMBL:BT002604 |
| InterPro:DNA-bd_dom_sf | Symbol:ERF12 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009873 |
| GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 | RefSeq:NP_174158.1 | ProteinID:OAP16208.1 | PFAM:PF00847 |
| PO:PO:0000037 | PO:PO:0000293 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0004507 | PO:PO:0007611 |
| PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009031 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0025022 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31677 | UniProt:Q94ID6 | SMART:SM00380 |
| SUPFAM:SSF54171 | UniParc:UPI00000AC728 | SEG:seg | : | : | : |
Description
ERF12Ethylene-responsive transcription factor 12 [Source:UniProtKB/Swiss-Prot;Acc:Q94ID6]
Coordinates
chr1:+:9951762..9953105
Molecular Weight (calculated)
20947.6 Da
IEP (calculated)
9.913
GRAVY (calculated)
-0.554
Length
189 amino acids
Sequence
(BLAST)
(BLAST)
001: MASTTCAREV HYRGVRKRPW GRYAAEIRDP WKKTRVWLGT FDTPEEAALA YDGAARFLRG IKAKTNFPSP LSLDLNHLPS APSAATAAAN NQPHQHQQLW
101: FAAPPPVPPS SDHHHQHHRI FLRTGVLNDK TSDYSSTEAP LYFTSSPNTA TSSPGYQVVG FPMMNSSPSP VTVRRGLAID LNEPPPLWL
101: FAAPPPVPPS SDHHHQHHRI FLRTGVLNDK TSDYSSTEAP LYFTSSPNTA TSSPGYQVVG FPMMNSSPSP VTVRRGLAID LNEPPPLWL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.