Factsheet for Os08t0173700-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG24553	Sorghum	nucleus	60.57	61.63
GSMUA_Achr7P17910_001	Banana	nucleus	55.43	59.88
KRG91757	Soybean	mitochondrion, nucleus	45.71	56.34
Zm00001d024436_P001	Maize	nucleus	59.43	55.91
KRH35019	Soybean	nucleus, plastid	46.29	51.59
PGSC0003DMT400056527	Potato	nucleus	44.0	48.12
Solyc04g072300.1.1	Tomato	mitochondrion, nucleus	43.43	47.5
Bra026949.1-P	Field mustard	nucleus	33.14	26.24
AT1G12890.1	Thale cress	nucleus	32.57	26.03
CDY11748	Canola	nucleus	32.0	24.24
Os02t0520000-00	Rice	nucleus	32.57	23.85
CDX94591	Canola	nucleus	32.57	23.65
Bra030076.1-P	Field mustard	nucleus	32.57	23.65
Bra010901.1-P	Field mustard	nucleus	31.43	23.5
CDX90126	Canola	nucleus	31.43	23.5
CDY15690	Canola	nucleus	32.0	23.43
Os06t0691100-00	Rice	nucleus	25.14	23.4
Os04t0669200-01	Rice	nucleus	24.57	22.63
AT1G28160.1	Thale cress	nucleus	31.43	22.45
Os05t0497300-01	Rice	nucleus	29.71	22.03
Os04t0399800-00	Rice	nucleus	36.57	21.92
Os05t0497200-01	Rice	nucleus	23.43	21.69
Os01t0797600-01	Rice	nucleus, plastid	28.57	21.28
Os04t0610400-01	Rice	nucleus	26.86	21.17
Os07t0669500-01	Rice	nucleus, plastid	35.43	19.5
CDY16037	Canola	nucleus	20.57	18.18
CDY26598	Canola	nucleus	20.0	17.68
Os02t0594300-00	Rice	nucleus	28.57	14.49

Protein Annotations

Gene3D:3.30.730.10	MapMan:35.1	EntrezGene:9270670	EMBL:AK241762	InterPro:AP2/ERF-transcript_factor	InterPro:AP2/ERF_dom
InterPro:AP2/ERF_dom_sf	ProteinID:BAD05539.1	ProteinID:BAH94135.1	ProteinID:BAT04043.1	InterPro:DNA-bd_dom_sf	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	EnsemblPlantsGene:Os08g0173700
EnsemblPlants:Os08t0173700-01	PFAM:PF00847	PIRSF:PIRSF038123	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31677
PANTHER:PTHR31677:SF39	UniProt:Q6Z4V0	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000022F283	RefSeq:XP_015649703.1
SEG:seg	:	:	:	:	:

Description

ETHYLENE RESPONSE FACTOR 80Similar to Ethylene-responsive transcription factor 4 (Ethylene-responsive element binding factor 4) (Related to APETALA-2 protein 5) (EREBP-4) (AtERF4). (Os08t0173700-01)

Coordinates

chr8:-:4303902..4304696

Molecular Weight (calculated)

19448.5 Da

IEP (calculated)

5.501

GRAVY (calculated)

-0.711

Length

175 amino acids

Sequence
(BLAST)

001: MADAAEQHHR QEETAAATTT PQQMMMRRRR ARASSEYLGV RRRPWGRYAA EIRNPYTKER HWLGTFDTAE EAAVAYDLSA ISISGAAAAR TNFLYPDMHH
101: HHPSPPQHAL SPAVPPPPPP PPPSPLYDDD YLSPAAAEEE VEAGDDESLT IATILQSFQY QQSVPPASSG SMFYY

Best Arabidopsis Sequence Match ( AT1G12890.1 )
(BLAST)

001: MLKSSNKRKS KEEKKLQEGK YLGVRRRPWG RYAAEIRNPF TKERHWLGTF DTAEEAAFAY DVAARSISGS LATTNFFYTE NTSLERHPQQ SLEPHMTWGS
101: SSLCLLQDQP FENNHFVADP ISSSFSQKQE SSTNLTNTFS HCYNDGDHVG QSKEISLPND MSNSLFGHQD KVGEHDNADH MKFGSVLSDE PLCFEYDYIG
201: NYLQSFLKDV NDDAPQFLM

Arabidopsis Description

ERF088Ethylene-responsive transcription factor ERF088 [Source:UniProtKB/Swiss-Prot;Acc:Q3E703]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.