Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G50640.1 | KRH48306 | AT2G45640.1 | 16429262 |
| AT1G50640.1 | KRH65197 | AT2G45640.1 | 16429262 |
| AT1G50640.1 | KRH51318 | AT4G38130.1 | 16429262 |
| AT1G50640.1 | KRH60609 | AT4G38130.1 | 16429262 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH14810 | Soybean | nucleus | 86.51 | 88.15 |
| GSMUA_Achr3P13010_001 | Banana | nucleus | 46.98 | 66.01 |
| GSMUA_Achr4P04060_001 | Banana | mitochondrion | 45.12 | 61.39 |
| VIT_12s0059g01460.t01 | Wine grape | nucleus | 56.74 | 59.8 |
| GSMUA_Achr4P06170_001 | Banana | nucleus | 51.16 | 59.46 |
| CDY37113 | Canola | mitochondrion, nucleus | 55.35 | 57.21 |
| KRH32582 | Soybean | nucleus | 24.19 | 57.14 |
| Solyc10g006130.1.1 | Tomato | mitochondrion, nucleus | 57.21 | 55.66 |
| PGSC0003DMT400037359 | Potato | mitochondrion, nucleus | 57.67 | 55.61 |
| GSMUA_Achr1P18230_001 | Banana | nucleus | 48.84 | 55.26 |
| Bra018864.1-P | Field mustard | nucleus | 52.09 | 55.17 |
| CDY22810 | Canola | nucleus | 52.09 | 55.17 |
| KRG98699 | Soybean | nucleus | 53.95 | 54.72 |
| KRH73797 | Soybean | nucleus | 56.28 | 54.5 |
| KRH46237 | Soybean | nucleus | 53.02 | 54.29 |
| Solyc07g064890.1.1 | Tomato | nucleus | 60.47 | 54.17 |
| PGSC0003DMT400057443 | Potato | nucleus | 60.47 | 54.17 |
| KRH14334 | Soybean | nucleus | 55.81 | 54.05 |
| AT1G50640.1 | Thale cress | mitochondrion, nucleus | 56.28 | 53.78 |
| GSMUA_Achr4P11430_001 | Banana | nucleus | 36.74 | 48.17 |
| KRH26242 | Soybean | nucleus | 27.44 | 45.74 |
| KRH55195 | Soybean | nucleus | 38.14 | 44.81 |
| KRH27281 | Soybean | nucleus | 37.21 | 41.45 |
| KRH21385 | Soybean | nucleus | 30.7 | 40.49 |
| KRH22040 | Soybean | nucleus | 36.28 | 40.41 |
| KRH10926 | Soybean | nucleus | 30.7 | 38.37 |
| KRH55920 | Soybean | nucleus | 36.28 | 37.5 |
| KRH25634 | Soybean | nucleus | 35.35 | 37.07 |
| KRH10927 | Soybean | nucleus | 37.67 | 36.99 |
| KRH67315 | Soybean | nucleus | 29.3 | 36.63 |
| KRH21384 | Soybean | nucleus | 37.67 | 36.49 |
| KRH45546 | Soybean | nucleus | 29.3 | 35.0 |
| KRG91757 | Soybean | mitochondrion, nucleus | 19.53 | 29.58 |
| KRH35019 | Soybean | nucleus, plastid | 19.53 | 26.75 |
| KRH06790 | Soybean | nucleus | 22.79 | 20.85 |
| KRH08427 | Soybean | nucleus | 25.12 | 19.71 |
| KRH70088 | Soybean | nucleus | 24.65 | 19.34 |
| KRH11206 | Soybean | nucleus | 26.51 | 18.27 |
| KRH21045 | Soybean | nucleus | 25.58 | 17.08 |
| KRH50906 | Soybean | nucleus | 27.44 | 17.05 |
| KRH02219 | Soybean | nucleus | 27.44 | 16.67 |
| KRH74517 | Soybean | nucleus | 26.51 | 15.7 |
| KRG99434 | Soybean | nucleus | 24.65 | 14.97 |
| KRH45585 | Soybean | nucleus | 24.19 | 14.69 |
| KRH69639 | Soybean | nucleus | 25.58 | 14.07 |
| KRH75649 | Soybean | nucleus | 17.21 | 13.36 |
Protein Annotations
| EntrezGene:100812313 | MapMan:15.5.7.1 | Gene3D:3.30.730.10 | UniProt:A0A0K2CTA8 | EMBL:ACUP02001273 | InterPro:AP2/ERF_dom |
| InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | EnsemblPlantsGene:GLYMA_02G267400 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 | EnsemblPlants:KRH73332 | ProteinID:KRH73332 | ProteinID:KRH73332.1 |
| EMBL:KT031072 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31677 | PANTHER:PTHR31677:SF17 |
| SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI000189CF49 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr2:-:45177546..45178996
Molecular Weight (calculated)
23434.1 Da
IEP (calculated)
5.333
GRAVY (calculated)
-0.600
Length
215 amino acids
Sequence
(BLAST)
(BLAST)
001: MRRGRTAAAA AAVVDPTPDQ AKETTRFRGV RKRPWGRFAA EIRDPWKKQR VWLGTFDSAE DAARAYDKAA RSFRGPKAKT NFPPFPGPAE ADHHSQIPLY
101: QAHGLSTKFE PVVQVNRPTS SGMSSTVESF SGPRVPSSSS RAKPLVVVVN PIIPLNDDED DCHSDCDSSS SVVDDGQDCV LISSFRQPLP FDLNLPPSDA
201: DDDNDDDLPA TALCL
101: QAHGLSTKFE PVVQVNRPTS SGMSSTVESF SGPRVPSSSS RAKPLVVVVN PIIPLNDDED DCHSDCDSSS SVVDDGQDCV LISSFRQPLP FDLNLPPSDA
201: DDDNDDDLPA TALCL
001: MRKGRGSSVV GPALPVTAGG SVKEPRYRGV RKRPWGRFAA EIRDPLKKSR VWLGTFDSAV DAARAYDTAA RNLRGPKAKT NFPIDCSPSS PLQPLTYLHN
101: QNLCSPPVIQ NQIDPFMDHR LYGGGNFQEQ QQQQIISRPA SSSMSSTVKS CSGPRPMEAA AASSSVAKPL HAIKRYPRTP PVAPEDCHSD CDSSSSVIDD
201: GDDIASSSSR RKTPFQFDLN FPPLDGVDLF AGGIDDLHCT DLRL
101: QNLCSPPVIQ NQIDPFMDHR LYGGGNFQEQ QQQQIISRPA SSSMSSTVKS CSGPRPMEAA AASSSVAKPL HAIKRYPRTP PVAPEDCHSD CDSSSSVIDD
201: GDDIASSSSR RKTPFQFDLN FPPLDGVDLF AGGIDDLHCT DLRL
Arabidopsis Description
ERF7Ethylene-responsive transcription factor 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LDE4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.