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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • mitochondrion 2
  • nucleus 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:nucleus, plastid
iPSORT:mitochondrion
MultiLoc:nucleus
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3B01G357500.1 Wheat nucleus, plastid 95.53 96.71
TraesCS3A01G328000.1 Wheat nucleus 96.34 95.95
HORVU0Hr1G007050.2 Barley nucleus, plastid 93.5 95.44
HORVU3Hr1G078150.2 Barley nucleus, plastid 93.5 95.44
Os01t0797600-01 Rice nucleus, plastid 78.86 82.55
Zm00001d043205_P001 Maize nucleus 76.83 79.75
OQU87713 Sorghum nucleus, plastid 78.05 79.34
Zm00001d012585_P001 Maize nucleus 72.76 74.27
TraesCS1D01G314800.1 Wheat nucleus 64.63 67.37
KRH32582 Soybean nucleus 22.36 60.44
GSMUA_Achr8P03550_001 Banana nucleus 44.72 50.93
KRH10927 Soybean nucleus 42.28 47.49
KRH21384 Soybean nucleus 42.28 46.85
VIT_12s0028g03270.t01 Wine grape nucleus 39.84 46.45
PGSC0003DMT400068959 Potato nucleus 41.87 45.98
Solyc07g053740.1.1 Tomato nucleus 41.06 44.89
Solyc10g009110.1.1 Tomato nucleus 38.62 42.79
CDX89866 Canola nucleus 31.3 42.78
PGSC0003DMT400058751 Potato nucleus 38.21 41.59
Bra015266.1-P Field mustard nucleus 30.89 41.53
GSMUA_Achr10P... Banana nucleus 36.99 40.99
CDY18185 Canola nucleus 29.67 40.56
TraesCS3D01G321700.1 Wheat nucleus 28.46 40.46
TraesCS2D01G425700.1 Wheat nucleus 34.96 39.63
Solyc03g006320.1.1 Tomato nucleus, plastid 33.74 38.43
TraesCS2D01G543900.1 Wheat nucleus 30.08 38.34
TraesCS6D01G161300.1 Wheat nucleus 30.89 36.72
TraesCS1D01G314700.1 Wheat nucleus 27.24 36.41
PGSC0003DMT400033391 Potato nucleus 33.74 36.09
KRH45546 Soybean nucleus 26.02 35.56
TraesCS7D01G426700.1 Wheat nucleus 28.05 34.67
TraesCS6D01G121100.1 Wheat nucleus 28.05 33.82
PGSC0003DMT400035731 Potato nucleus 37.8 31.31
TraesCS2D01G286900.1 Wheat plastid 25.2 23.66
TraesCS6D01G192200.1 Wheat nucleus 27.64 22.82
TraesCS2D01G118200.1 Wheat nucleus, plastid 21.14 17.63
Protein Annotations
MapMan:15.5.7.1Gene3D:3.30.730.10InterPro:AP2/ERF-transcript_factorInterPro:AP2/ERF_domInterPro:AP2/ERF_dom_sfInterPro:DNA-bd_dom_sf
GO:GO:0000003GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0003700GO:GO:0005488
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006355
GO:GO:0006629GO:GO:0006950GO:GO:0007275GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009409GO:GO:0009414GO:GO:0009605GO:GO:0009607GO:GO:0009611GO:GO:0009625
GO:GO:0009628GO:GO:0009651GO:GO:0009653GO:GO:0009719GO:GO:0009723GO:GO:0009733
GO:GO:0009735GO:GO:0009737GO:GO:0009751GO:GO:0009753GO:GO:0009791GO:GO:0009987
GO:GO:0010311GO:GO:0010337GO:GO:0010364GO:GO:0010728GO:GO:0040007GO:GO:0043565
GO:GO:0044212GO:GO:0045892GO:GO:0080027GO:GO:0080113GO:GO:0080141GO:GO:2000068
InterPro:IPR001471InterPro:IPR036955PFAM:PF00847PIRSF:PIRSF038123PRINTS:PR00367PFscan:PS51032
PANTHER:PTHR31677PANTHER:PTHR31677:SF19SMART:SM00380SUPFAM:SSF54171TMHMM:TMhelixEnsemblPlantsGene:TraesCS3D01G321500
EnsemblPlants:TraesCS3D01G321500.1TIGR:cd00018SEG:seg:::
Description
No Description!
Coordinates
chr3D:+:434210882..434211622
Molecular Weight (calculated)
24979.2 Da
IEP (calculated)
9.546
GRAVY (calculated)
-0.213
Length
246 amino acids
Sequence
(BLAST)
001: MAPRAAEKAP VSPPTGLGLG LGGGVGVVAG GAHYRGVRKR PWGRYAAEIR DPAKKSRVWL GTYDTAEEAA RAYDTAAREF RGAKAKTNFP FPSSSSSSPV
101: AGAGGGGSPS SDSTLDSSGG GSGGCAQAPM QAIPLPPALD LDLFHRAAAV TAVAGGGMRF PFNGYPVAPR QPMHPYFFYE QAAAAAAAAS GYRALKVAQP
201: VTVAAVARSD SDSSSVVDLS PSPPAVTAHK AVAFDLDLNR PPPSED
Best Arabidopsis Sequence Match ( AT3G15210.1 )
(BLAST)
001: MAKMGLKPDP ATTNQTHNNA KEIRYRGVRK RPWGRYAAEI RDPGKKTRVW LGTFDTAEEA ARAYDTAARD FRGAKAKTNF PTFLELSDQK VPTGFARSPS
101: QSSTLDCASP PTLVVPSATA GNVPPQLELS LGGGGGGSCY QIPMSRPVYF LDLMGIGNVG RGQPPPVTSA FRSPVVHVAT KMACGAQSDS DSSSVVDFEG
201: GMEKRSQLLD LDLNLPPPSE QA
Arabidopsis Description
ERF4Ethylene-responsive transcription factor 4 [Source:UniProtKB/Swiss-Prot;Acc:O80340]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.