Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 3
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra014270.1-P | Field mustard | plastid | 70.69 | 78.85 |
| CDY66468 | Canola | plastid | 69.83 | 77.88 |
| CDY66467 | Canola | plastid | 71.55 | 72.17 |
| CDY03627 | Canola | plastid | 71.55 | 72.17 |
| CDY22835 | Canola | mitochondrion, plastid | 71.55 | 71.55 |
| Bra018904.1-P | Field mustard | mitochondrion, plastid | 71.55 | 71.55 |
| CDY65223 | Canola | plastid | 70.69 | 70.69 |
| CDY49036 | Canola | mitochondrion | 68.1 | 66.39 |
| CDY54388 | Canola | mitochondrion | 68.1 | 66.39 |
| CDY66732 | Canola | mitochondrion | 68.1 | 66.39 |
| Bra030445.1-P | Field mustard | mitochondrion | 67.24 | 65.55 |
| AT3G20898.1 | Thale cress | cytosol, plastid | 42.24 | 45.37 |
| GSMUA_Achr1P22910_001 | Banana | cytosol, nucleus, plasma membrane, plastid | 23.28 | 36.0 |
| KRH73971 | Soybean | nucleus | 34.48 | 34.19 |
| KRG98388 | Soybean | plastid | 39.66 | 28.4 |
| KRH46471 | Soybean | nucleus | 40.52 | 25.41 |
| PGSC0003DMT400019013 | Potato | plastid | 31.03 | 23.53 |
| VIT_06s0004g02230.t01 | Wine grape | plastid | 39.66 | 18.78 |
Protein Annotations
| MapMan:13.1.1.3.2 | EntrezGene:841559 | UniProt:A0A178WGQ3 | EMBL:AC006085 | ProteinID:AEE32655.1 | ArrayExpress:AT1G51355 |
| EnsemblPlantsGene:AT1G51355 | RefSeq:AT1G51355 | TAIR:AT1G51355 | RefSeq:AT1G51355-TAIR-G | EnsemblPlants:AT1G51355.1 | TAIR:AT1G51355.1 |
| EMBL:BT024784 | GO:GO:0003674 | GO:GO:0004860 | GO:GO:0006464 | GO:GO:0006469 | GO:GO:0007049 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0030234 | RefSeq:NP_683417.1 |
| ProteinID:OAP16931.1 | PO:PO:0000293 | PANTHER:PTHR33142 | PANTHER:PTHR33142:SF19 | UniProt:Q3ECS5 | UniParc:UPI00001630EC |
| SEG:seg | : | : | : | : | : |
Description
SMR9Cyclin-dependent protein kinase inhibitor SMR9 [Source:UniProtKB/Swiss-Prot;Acc:Q3ECS5]
Coordinates
chr1:+:19041397..19042414
Molecular Weight (calculated)
12709.2 Da
IEP (calculated)
11.267
GRAVY (calculated)
-0.728
Length
116 amino acids
Sequence
(BLAST)
(BLAST)
001: MASKGKKPLR RTTTRRRKRS HFKNPSPPCS INSDVTSTSS TSTSPTSTAT PSPVSAESGC CTPEKSRIPE MLTCPPAPKK QKVAQNCALR RRQIAFFAPP
101: DVELFFVFAL GQQNNK
101: DVELFFVFAL GQQNNK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.