Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 5
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY49036 | Canola | mitochondrion | 100.0 | 100.0 |
| CDY66732 | Canola | mitochondrion | 96.64 | 96.64 |
| CDY03627 | Canola | plastid | 69.75 | 72.17 |
| CDY66467 | Canola | plastid | 69.75 | 72.17 |
| CDY22835 | Canola | mitochondrion, plastid | 68.07 | 69.83 |
| CDY66468 | Canola | plastid | 60.5 | 69.23 |
| CDY65223 | Canola | plastid | 67.23 | 68.97 |
| AT1G51355.1 | Thale cress | nucleus, plastid | 66.39 | 68.1 |
| CDY19592 | Canola | cytosol | 40.34 | 44.04 |
| CDY06392 | Canola | cytosol | 38.66 | 40.35 |
| GSMUA_Achr1P22910_001 | Banana | cytosol, nucleus, plasma membrane, plastid | 24.37 | 38.67 |
| CDY68499 | Canola | cytosol | 34.45 | 38.32 |
| CDY68033 | Canola | nucleus | 33.61 | 37.38 |
| CDY37331 | Canola | nucleus | 35.29 | 36.21 |
| KRH73971 | Soybean | nucleus | 30.25 | 30.77 |
| CDY27555 | Canola | nucleus | 36.13 | 27.74 |
| KRG98388 | Soybean | plastid | 35.29 | 25.93 |
| KRH46471 | Soybean | nucleus | 38.66 | 24.86 |
| PGSC0003DMT400019013 | Potato | plastid | 31.93 | 24.84 |
| VIT_06s0004g02230.t01 | Wine grape | plastid | 34.45 | 16.73 |
Protein Annotations
| EnsemblPlants:CDY54388 | EnsemblPlantsGene:GSBRNA2T00013985001 | PANTHER:PTHR33142 | PANTHER:PTHR33142:SF19 | ProteinID:CDY49036.1 | ProteinID:CDY54388 |
| ProteinID:CDY54388.1 | SEG:seg | UniParc:UPI0004EAF340 | UniProt:A0A078IZ11 | MapMan:13.1.1.3.2 | : |
Description
BnaCnng26860DBnaA01g22820D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IZ11]
Coordinates
chrLK033313:+:451..810
Molecular Weight (calculated)
12983.6 Da
IEP (calculated)
11.601
GRAVY (calculated)
-0.617
Length
119 amino acids
Sequence
(BLAST)
(BLAST)
001: MASKGKTPVR RTTPRRRKTI KNSSSPCSIN SDVTSTLSST SISSTATSTS PISSHGCCTP KSTKSRIPEM LTCPPAPKKQ RVAQDSALRR RQITFFAPPD
101: VELLFVLALR NNHGQQIDK
101: VELLFVLALR NNHGQQIDK
001: MASKGKKPLR RTTTRRRKRS HFKNPSPPCS INSDVTSTSS TSTSPTSTAT PSPVSAESGC CTPEKSRIPE MLTCPPAPKK QKVAQNCALR RRQIAFFAPP
101: DVELFFVFAL GQQNNK
101: DVELFFVFAL GQQNNK
Arabidopsis Description
SMR9Cyclin-dependent protein kinase inhibitor SMR9 [Source:UniProtKB/Swiss-Prot;Acc:Q3ECS5]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.