Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY19592 | Canola | cytosol | 78.07 | 81.65 |
| CDY68499 | Canola | cytosol | 69.3 | 73.83 |
| CDY68033 | Canola | nucleus | 67.54 | 71.96 |
| CDY37331 | Canola | nucleus | 72.81 | 71.55 |
| AT3G20898.1 | Thale cress | cytosol, plastid | 63.16 | 66.67 |
| Bra031241.1-P | Field mustard | nucleus | 80.7 | 65.71 |
| CDY27555 | Canola | nucleus | 71.93 | 52.9 |
| CDY22835 | Canola | mitochondrion, plastid | 42.11 | 41.38 |
| CDY65223 | Canola | plastid | 41.23 | 40.52 |
| CDY66468 | Canola | plastid | 36.84 | 40.38 |
| CDY66732 | Canola | mitochondrion | 42.11 | 40.34 |
| CDY66467 | Canola | plastid | 40.35 | 40.0 |
| CDY03627 | Canola | plastid | 40.35 | 40.0 |
| CDY54388 | Canola | mitochondrion | 40.35 | 38.66 |
| CDY49036 | Canola | mitochondrion | 40.35 | 38.66 |
| GSMUA_Achr1P22910_001 | Banana | cytosol, nucleus, plasma membrane, plastid | 24.56 | 37.33 |
| KRH73971 | Soybean | nucleus | 31.58 | 30.77 |
| KRG98388 | Soybean | plastid | 40.35 | 28.4 |
| KRH46471 | Soybean | nucleus | 41.23 | 25.41 |
| PGSC0003DMT400019013 | Potato | plastid | 31.58 | 23.53 |
| VIT_06s0004g02230.t01 | Wine grape | plastid | 37.72 | 17.55 |
Protein Annotations
| EnsemblPlants:CDY06392 | EnsemblPlantsGene:GSBRNA2T00122363001 | PANTHER:PTHR33142 | PANTHER:PTHR33142:SF19 | ProteinID:CDY06392 | ProteinID:CDY06392.1 |
| SEG:seg | UniParc:UPI0004EE4CC9 | MapMan:13.1.1.3.2 | : | : | : |
Description
BnaC05g31380D
Coordinates
chrLK031969:+:304513..305011
Molecular Weight (calculated)
12800.7 Da
IEP (calculated)
11.310
GRAVY (calculated)
-0.836
Length
114 amino acids
Sequence
(BLAST)
(BLAST)
001: MASRKARKPN RAEKKLKRTH FKKKLPQHKN TDTPTILDHT SSSTIVLTSS PGKGGVGDGC CTPKSQKSRI PEMLTCPPAP KKQRVPPNCT LRRRQIVFFA
101: PPEIELFFVK ANHQ
101: PPEIELFFVK ANHQ
001: MASKKARKPN RAEKKLTRSC FKKQVPQHNN INTNTIYSVP SPSPAAVLTS PGGCCTPKAK KSRIPEMLTC PPAPKKQRVS KNCVLRRRQI VFFAPPEIEL
101: FFVNAHDR
101: FFVNAHDR
Arabidopsis Description
SMR13Cyclin-dependent protein kinase inhibitor SMR13 [Source:UniProtKB/Swiss-Prot;Acc:F4IWB3]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.