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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • mitochondrion 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY37331 Canola nucleus 70.32 93.97
CDY19592 Canola cytosol 51.61 73.39
CDY06392 Canola cytosol 52.9 71.93
CDY68499 Canola cytosol 48.39 70.09
CDY68033 Canola nucleus 47.74 69.16
AT3G20898.1 Thale cress cytosol, plastid 46.45 66.67
Bra023914.1-P Field mustard nucleus, plastid 58.06 63.83
CDY66468 Canola plastid 25.81 38.46
CDY22835 Canola mitochondrion, plastid 28.39 37.93
CDY66732 Canola mitochondrion 29.03 37.82
CDY66467 Canola plastid 27.74 37.39
CDY03627 Canola plastid 27.74 37.39
GSMUA_Achr1P22910_001 Banana cytosol, nucleus, plasma membrane, plastid 18.06 37.33
CDY65223 Canola plastid 27.74 37.07
CDY54388 Canola mitochondrion 27.74 36.13
CDY49036 Canola mitochondrion 27.74 36.13
KRH73971 Soybean nucleus 21.94 29.06
KRG98388 Soybean plastid 29.03 27.78
PGSC0003DMT400019013 Potato plastid 23.23 23.53
KRH46471 Soybean nucleus 27.74 23.24
VIT_06s0004g02230.t01 Wine grape plastid 29.03 18.37
Protein Annotations
EnsemblPlants:CDY27555EnsemblPlantsGene:GSBRNA2T00038264001PANTHER:PTHR33142PANTHER:PTHR33142:SF19ProteinID:CDY27555ProteinID:CDY27555.1
SEG:segUniParc:UPI0004EEFCC9UniProt:A0A078GLX9MapMan:13.1.1.3.2::
Description
BnaC01g32380DBnaC01g32380D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GLX9]
Coordinates
chrLK032206:-:284851..285853
Molecular Weight (calculated)
17103.3 Da
IEP (calculated)
10.324
GRAVY (calculated)
-1.057
Length
155 amino acids
Sequence
(BLAST)
001: MPETKSNYGR GDGDKGSCEE KGTVEDRGDG DDEKNAWSKM PSQKARKPNR AGKKLKRTHF KKPLPQHKNT NTANTNNYVP SPSPAVLTSL SPGEGGGGGG
101: CYTPKAHKYR IPELLTCPPA PKKQRVPQNC VLRRRQIVFF APPEIELFFV KAVDQ
Best Arabidopsis Sequence Match ( AT3G20898.1 )
(BLAST)
001: MASKKARKPN RAEKKLTRSC FKKQVPQHNN INTNTIYSVP SPSPAAVLTS PGGCCTPKAK KSRIPEMLTC PPAPKKQRVS KNCVLRRRQI VFFAPPEIEL
101: FFVNAHDR
Arabidopsis Description
SMR13Cyclin-dependent protein kinase inhibitor SMR13 [Source:UniProtKB/Swiss-Prot;Acc:F4IWB3]
SUBAcon: [plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.