Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY37331 | Canola | nucleus | 70.32 | 93.97 |
CDY19592 | Canola | cytosol | 51.61 | 73.39 |
CDY06392 | Canola | cytosol | 52.9 | 71.93 |
CDY68499 | Canola | cytosol | 48.39 | 70.09 |
CDY68033 | Canola | nucleus | 47.74 | 69.16 |
AT3G20898.1 | Thale cress | cytosol, plastid | 46.45 | 66.67 |
Bra023914.1-P | Field mustard | nucleus, plastid | 58.06 | 63.83 |
CDY66468 | Canola | plastid | 25.81 | 38.46 |
CDY22835 | Canola | mitochondrion, plastid | 28.39 | 37.93 |
CDY66732 | Canola | mitochondrion | 29.03 | 37.82 |
CDY66467 | Canola | plastid | 27.74 | 37.39 |
CDY03627 | Canola | plastid | 27.74 | 37.39 |
GSMUA_Achr1P22910_001 | Banana | cytosol, nucleus, plasma membrane, plastid | 18.06 | 37.33 |
CDY65223 | Canola | plastid | 27.74 | 37.07 |
CDY54388 | Canola | mitochondrion | 27.74 | 36.13 |
CDY49036 | Canola | mitochondrion | 27.74 | 36.13 |
KRH73971 | Soybean | nucleus | 21.94 | 29.06 |
KRG98388 | Soybean | plastid | 29.03 | 27.78 |
PGSC0003DMT400019013 | Potato | plastid | 23.23 | 23.53 |
KRH46471 | Soybean | nucleus | 27.74 | 23.24 |
VIT_06s0004g02230.t01 | Wine grape | plastid | 29.03 | 18.37 |
Protein Annotations
EnsemblPlants:CDY27555 | EnsemblPlantsGene:GSBRNA2T00038264001 | PANTHER:PTHR33142 | PANTHER:PTHR33142:SF19 | ProteinID:CDY27555 | ProteinID:CDY27555.1 |
SEG:seg | UniParc:UPI0004EEFCC9 | UniProt:A0A078GLX9 | MapMan:13.1.1.3.2 | : | : |
Description
BnaC01g32380DBnaC01g32380D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GLX9]
Coordinates
chrLK032206:-:284851..285853
Molecular Weight (calculated)
17103.3 Da
IEP (calculated)
10.324
GRAVY (calculated)
-1.057
Length
155 amino acids
Sequence
(BLAST)
(BLAST)
001: MPETKSNYGR GDGDKGSCEE KGTVEDRGDG DDEKNAWSKM PSQKARKPNR AGKKLKRTHF KKPLPQHKNT NTANTNNYVP SPSPAVLTSL SPGEGGGGGG
101: CYTPKAHKYR IPELLTCPPA PKKQRVPQNC VLRRRQIVFF APPEIELFFV KAVDQ
101: CYTPKAHKYR IPELLTCPPA PKKQRVPQNC VLRRRQIVFF APPEIELFFV KAVDQ
001: MASKKARKPN RAEKKLTRSC FKKQVPQHNN INTNTIYSVP SPSPAAVLTS PGGCCTPKAK KSRIPEMLTC PPAPKKQRVS KNCVLRRRQI VFFAPPEIEL
101: FFVNAHDR
101: FFVNAHDR
Arabidopsis Description
SMR13Cyclin-dependent protein kinase inhibitor SMR13 [Source:UniProtKB/Swiss-Prot;Acc:F4IWB3]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.