Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 2
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY68499 | Canola | cytosol | 73.15 | 73.83 |
| CDY68033 | Canola | nucleus | 71.3 | 71.96 |
| CDY19592 | Canola | cytosol | 66.67 | 66.06 |
| CDY06392 | Canola | cytosol | 66.67 | 63.16 |
| CDY37331 | Canola | nucleus | 65.74 | 61.21 |
| Bra001805.1-P | Field mustard | nucleus | 70.37 | 55.47 |
| Bra023914.1-P | Field mustard | nucleus, plastid | 66.67 | 51.06 |
| Bra031241.1-P | Field mustard | nucleus | 63.89 | 49.29 |
| CDY27555 | Canola | nucleus | 66.67 | 46.45 |
| AT1G51355.1 | Thale cress | nucleus, plastid | 45.37 | 42.24 |
| GSMUA_Achr1P22910_001 | Banana | cytosol, nucleus, plasma membrane, plastid | 26.85 | 38.67 |
| KRH73971 | Soybean | nucleus | 32.41 | 29.91 |
| KRG98388 | Soybean | plastid | 37.96 | 25.31 |
| PGSC0003DMT400019013 | Potato | plastid | 34.26 | 24.18 |
| KRH46471 | Soybean | nucleus | 39.81 | 23.24 |
| VIT_06s0004g02230.t01 | Wine grape | plastid | 35.19 | 15.51 |
Protein Annotations
| MapMan:13.1.1.3.2 | EntrezGene:7922426 | ProteinID:AEE76437.1 | ArrayExpress:AT3G20898 | EnsemblPlantsGene:AT3G20898 | RefSeq:AT3G20898 |
| TAIR:AT3G20898 | RefSeq:AT3G20898-TAIR-G | EnsemblPlants:AT3G20898.1 | TAIR:AT3G20898.1 | Unigene:At.47866 | ProteinID:BAB01899.1 |
| UniProt:F4IWB3 | GO:GO:0003674 | GO:GO:0004860 | GO:GO:0006464 | GO:GO:0006469 | GO:GO:0007049 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0030234 | RefSeq:NP_001154630.1 |
| PO:PO:0000293 | PANTHER:PTHR33142 | PANTHER:PTHR33142:SF19 | UniParc:UPI0001A7B39E | : | : |
Description
SMR13Cyclin-dependent protein kinase inhibitor SMR13 [Source:UniProtKB/Swiss-Prot;Acc:F4IWB3]
Coordinates
chr3:+:7323635..7324634
Molecular Weight (calculated)
12129.9 Da
IEP (calculated)
11.250
GRAVY (calculated)
-0.645
Length
108 amino acids
Sequence
(BLAST)
(BLAST)
001: MASKKARKPN RAEKKLTRSC FKKQVPQHNN INTNTIYSVP SPSPAAVLTS PGGCCTPKAK KSRIPEMLTC PPAPKKQRVS KNCVLRRRQI VFFAPPEIEL
101: FFVNAHDR
101: FFVNAHDR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.