Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY19592 | Canola | cytosol | 69.83 | 74.31 |
| CDY06392 | Canola | cytosol | 71.55 | 72.81 |
| CDY68499 | Canola | cytosol | 66.38 | 71.96 |
| CDY68033 | Canola | nucleus | 65.52 | 71.03 |
| CDY27555 | Canola | nucleus | 93.97 | 70.32 |
| Bra023914.1-P | Field mustard | nucleus, plastid | 83.62 | 68.79 |
| AT3G20898.1 | Thale cress | cytosol, plastid | 61.21 | 65.74 |
| CDY66468 | Canola | plastid | 34.48 | 38.46 |
| CDY66467 | Canola | plastid | 37.07 | 37.39 |
| CDY03627 | Canola | plastid | 37.07 | 37.39 |
| GSMUA_Achr1P22910_001 | Banana | cytosol, nucleus, plasma membrane, plastid | 24.14 | 37.33 |
| CDY22835 | Canola | mitochondrion, plastid | 37.07 | 37.07 |
| CDY66732 | Canola | mitochondrion | 37.93 | 36.97 |
| CDY65223 | Canola | plastid | 36.21 | 36.21 |
| CDY54388 | Canola | mitochondrion | 36.21 | 35.29 |
| CDY49036 | Canola | mitochondrion | 36.21 | 35.29 |
| KRH73971 | Soybean | nucleus | 28.45 | 28.21 |
| KRG98388 | Soybean | plastid | 36.21 | 25.93 |
| PGSC0003DMT400019013 | Potato | plastid | 29.31 | 22.22 |
| KRH46471 | Soybean | nucleus | 35.34 | 22.16 |
| VIT_06s0004g02230.t01 | Wine grape | plastid | 36.21 | 17.14 |
Protein Annotations
| EnsemblPlants:CDY37331 | EnsemblPlantsGene:GSBRNA2T00063861001 | PANTHER:PTHR33142 | PANTHER:PTHR33142:SF19 | ProteinID:CDY37331 | ProteinID:CDY37331.1 |
| SEG:seg | UniParc:UPI0004EE22C5 | UniProt:A0A078HHV6 | MapMan:13.1.1.3.2 | : | : |
Description
BnaA01g25510DBnaA01g25510D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HHV6]
Coordinates
chrLK032397:-:352814..353239
Molecular Weight (calculated)
12929.7 Da
IEP (calculated)
10.885
GRAVY (calculated)
-0.828
Length
116 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSQKARKPN RAEKKLKRTH FKKPLPQHKN TDTTNTNNYV PSPSPAVLTS LSPGEGGGGG GYCTPKAHKH RIPELLTCPP APKKQRVPQN CVLHRRQIVF
101: FAPPEIELFF VKAVDQ
101: FAPPEIELFF VKAVDQ
001: MASKKARKPN RAEKKLTRSC FKKQVPQHNN INTNTIYSVP SPSPAAVLTS PGGCCTPKAK KSRIPEMLTC PPAPKKQRVS KNCVLRRRQI VFFAPPEIEL
101: FFVNAHDR
101: FFVNAHDR
Arabidopsis Description
SMR13Cyclin-dependent protein kinase inhibitor SMR13 [Source:UniProtKB/Swiss-Prot;Acc:F4IWB3]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.