Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G51355.1 | KRH06239 | AT1G54060.1 | 21798944 |
| AT1G51355.1 | KRH47662 | AT1G54060.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P22910_001 | Banana | cytosol, nucleus, plasma membrane, plastid | 23.93 | 37.33 |
| AT1G51355.1 | Thale cress | nucleus, plastid | 34.19 | 34.48 |
| KRH71971 | Soybean | nucleus | 36.75 | 34.4 |
| KRG98388 | Soybean | plastid | 46.15 | 33.33 |
| CDY19592 | Canola | cytosol | 30.77 | 33.03 |
| AT3G20898.1 | Thale cress | cytosol, plastid | 29.91 | 32.41 |
| KRH66969 | Soybean | mitochondrion, nucleus | 32.48 | 31.93 |
| CDY68033 | Canola | nucleus | 29.06 | 31.78 |
| Bra014270.1-P | Field mustard | plastid | 28.21 | 31.73 |
| CDY06392 | Canola | cytosol | 30.77 | 31.58 |
| CDY68499 | Canola | cytosol | 28.21 | 30.84 |
| CDY66468 | Canola | plastid | 27.35 | 30.77 |
| CDY54388 | Canola | mitochondrion | 30.77 | 30.25 |
| CDY49036 | Canola | mitochondrion | 30.77 | 30.25 |
| CDY65223 | Canola | plastid | 29.91 | 30.17 |
| CDY22835 | Canola | mitochondrion, plastid | 29.91 | 30.17 |
| Bra018904.1-P | Field mustard | mitochondrion, plastid | 29.91 | 30.17 |
| KRH33113 | Soybean | nucleus | 33.33 | 29.55 |
| CDY66732 | Canola | mitochondrion | 29.91 | 29.41 |
| Bra030445.1-P | Field mustard | mitochondrion | 29.91 | 29.41 |
| KRH46471 | Soybean | nucleus | 46.15 | 29.19 |
| KRG95281 | Soybean | plastid | 35.9 | 28.97 |
| PGSC0003DMT400019013 | Potato | plastid | 37.61 | 28.76 |
| CDY66467 | Canola | plastid | 28.21 | 28.7 |
| CDY03627 | Canola | plastid | 28.21 | 28.7 |
| CDY37331 | Canola | nucleus | 28.21 | 28.45 |
| Bra031241.1-P | Field mustard | nucleus | 30.77 | 25.71 |
| Bra001805.1-P | Field mustard | nucleus | 29.06 | 24.82 |
| Bra023914.1-P | Field mustard | nucleus, plastid | 29.06 | 24.11 |
| CDY27555 | Canola | nucleus | 29.06 | 21.94 |
| VIT_06s0004g02230.t01 | Wine grape | plastid | 40.17 | 19.18 |
Protein Annotations
| EMBL:ACUP02001291 | EnsemblPlants:KRH73971 | EnsemblPlantsGene:GLYMA_02G303900 | PANTHER:PTHR33142 | PANTHER:PTHR33142:SF19 | ProteinID:KRH73971 |
| ProteinID:KRH73971.1 | UniParc:UPI00023BD08C | UniProt:I1JJN4 | MapMan:13.1.1.3.2 | : | : |
Description
hypothetical protein
Coordinates
chr2:-:47903689..47904913
Molecular Weight (calculated)
13201.2 Da
IEP (calculated)
11.055
GRAVY (calculated)
-0.798
Length
117 amino acids
Sequence
(BLAST)
(BLAST)
001: MMVPSGRTEP TNSRKKKKIT RGKPARRHCK KQHQESRKQE TPKKRDMGSD VAAVSSTPKG EKFRIAEVTT CPPAPKKKPR LLSNCSLRRS PLAFFAPPDL
101: ETFFCFALQD LPVSFVC
101: ETFFCFALQD LPVSFVC
001: MASKGKKPLR RTTTRRRKRS HFKNPSPPCS INSDVTSTSS TSTSPTSTAT PSPVSAESGC CTPEKSRIPE MLTCPPAPKK QKVAQNCALR RRQIAFFAPP
101: DVELFFVFAL GQQNNK
101: DVELFFVFAL GQQNNK
Arabidopsis Description
SMR9Cyclin-dependent protein kinase inhibitor SMR9 [Source:UniProtKB/Swiss-Prot;Acc:Q3ECS5]
SUBAcon: [nucleus,plastid]
SUBAcon: [nucleus,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.