Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra034380.1-P | Field mustard | cytosol | 81.93 | 83.95 |
CDX77145 | Canola | cytosol | 81.93 | 83.95 |
CDY30517 | Canola | cytosol | 81.93 | 83.95 |
AT2G27960.1 | Thale cress | cytosol | 86.75 | 82.76 |
KRH30550 | Soybean | cytosol | 86.75 | 81.82 |
KRH25124 | Soybean | cytosol | 86.75 | 81.82 |
Zm00001d048394_P001 | Maize | nucleus | 85.54 | 81.61 |
PGSC0003DMT400001218 | Potato | cytosol | 85.54 | 80.68 |
VIT_06s0061g00810.t01 | Wine grape | cytosol | 85.54 | 80.68 |
KXG40187 | Sorghum | nucleus | 84.34 | 80.46 |
Os03t0146300-01 | Rice | nucleus | 86.75 | 80.0 |
GSMUA_Achr2P11710_001 | Banana | nucleus | 89.16 | 79.57 |
PGSC0003DMT400048460 | Potato | cytosol | 84.34 | 79.55 |
TraesCS4A01G410900.1 | Wheat | nucleus | 85.54 | 78.89 |
TraesCS4B01G311000.1 | Wheat | nucleus | 85.54 | 78.89 |
TraesCS4D01G308900.1 | Wheat | nucleus | 85.54 | 78.89 |
Zm00001d027655_P001 | Maize | cytosol | 77.11 | 61.54 |
GSMUA_Achr2P11750_001 | Banana | cytosol | 89.16 | 55.64 |
HORVU4Hr1G079310.1 | Barley | cytosol, mitochondrion, nucleus, plastid | 85.54 | 52.99 |
Zm00001d015611_P002 | Maize | plastid | 72.29 | 33.52 |
Protein Annotations
MapMan:13.1.1.2.8 | Gene3D:3.30.170.10 | EntrezGene:817341 | UniProt:A0A178W1T0 | ProteinID:AAD21505.1 | ProteinID:AEC08065.1 |
ArrayExpress:AT2G27970 | EnsemblPlantsGene:AT2G27970 | RefSeq:AT2G27970 | TAIR:AT2G27970 | RefSeq:AT2G27970-TAIR-G | EnsemblPlants:AT2G27970.1 |
TAIR:AT2G27970.1 | EMBL:BT010784 | EMBL:BT011257 | Symbol:CKS2 | InterPro:Cyclin-dep_kinase_reg-sub | InterPro:Cyclin-dep_kinase_reg-sub_sf |
GO:GO:0000307 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0006139 | GO:GO:0006464 | GO:GO:0007049 |
GO:GO:0007346 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016538 |
GO:GO:0019005 | GO:GO:0019538 | GO:GO:0019901 | GO:GO:0030234 | GO:GO:0042393 | GO:GO:0043130 |
GO:GO:0045737 | GO:GO:0045859 | GO:GO:0045893 | GO:GO:0051301 | GO:GO:0061575 | InterPro:IPR036858 |
RefSeq:NP_180364.1 | ProteinID:OAP11293.1 | PFAM:PF01111 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 |
PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 |
PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 |
PO:PO:0025281 | PRINTS:PR00296 | ScanProsite:PS00944 | PANTHER:PTHR23415 | PANTHER:PTHR23415:SF29 | UniProt:Q9SJJ5 |
SMART:SM01084 | SUPFAM:SSF55637 | UniParc:UPI00000A91F3 | : | : | : |
Description
CKS2Cyclin-dependent kinases regulatory subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJJ5]
Coordinates
chr2:-:11912151..11913425
Molecular Weight (calculated)
9988.0 Da
IEP (calculated)
9.466
GRAVY (calculated)
-0.730
Length
83 amino acids
Sequence
(BLAST)
(BLAST)
1: MGQIQYSDKY FDDTFEYRHV VLPPEVAKLL PKNRILSESE WRAIGVQQSR GWVHYAIHRP EPHIMLFRRP LNYQQEHQAQ IAK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.