Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 4
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY30132 | Canola | mitochondrion, plastid | 83.33 | 82.24 |
| Bra027193.1-P | Field mustard | mitochondrion, plastid | 82.0 | 80.92 |
| CDX97719 | Canola | mitochondrion | 82.0 | 80.92 |
| CDY50621 | Canola | mitochondrion, nucleus | 46.0 | 73.4 |
| KRH44358 | Soybean | mitochondrion | 32.67 | 29.34 |
| KRH23447 | Soybean | mitochondrion | 37.33 | 25.93 |
| KRH09868 | Soybean | mitochondrion | 36.67 | 25.35 |
| AT1G15260.1 | Thale cress | mitochondrion | 29.33 | 24.72 |
| PGSC0003DMT400042550 | Potato | mitochondrion | 29.33 | 24.18 |
| KRH47035 | Soybean | mitochondrion | 34.0 | 23.83 |
| Solyc03g120790.1.1 | Tomato | nucleus | 31.33 | 20.52 |
| PGSC0003DMT400006511 | Potato | cytosol | 30.67 | 20.09 |
| PGSC0003DMT400089587 | Potato | cytosol | 30.67 | 20.09 |
Protein Annotations
| MapMan:35.2 | EntrezGene:820852 | UniProt:A0A178VIA4 | ProteinID:AEE75768.1 | ArrayExpress:AT3G16070 | EnsemblPlantsGene:AT3G16070 |
| RefSeq:AT3G16070 | TAIR:AT3G16070 | RefSeq:AT3G16070-TAIR-G | EnsemblPlants:AT3G16070.1 | TAIR:AT3G16070.1 | ProteinID:BAB02672.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004386 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0016787 |
| RefSeq:NP_188228.1 | ProteinID:OAP05045.1 | PO:PO:0000293 | PANTHER:PTHR35461 | PANTHER:PTHR35461:SF1 | UniProt:Q9LW80 |
| UniParc:UPI00000AB72F | : | : | : | : | : |
Description
LOW protein: ATP-dependent RNA helicase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LW80]
Coordinates
chr3:-:5451533..5452363
Molecular Weight (calculated)
17594.7 Da
IEP (calculated)
6.235
GRAVY (calculated)
-0.597
Length
150 amino acids
Sequence
(BLAST)
(BLAST)
001: MFQKTNSFFH RTLHSLKSII IRAGKKLPRP KTHFSCTFCR SNSLDGDNIY ASFLNIWESD LENSIEGPLK LEHKVQEQEQ YHQVKKTEAC SSYSSRDCDT
101: MEKKINEMYM TETVDIEQAL DVEEALHYYS RISSPVYLNI VDKFFTDLYS
101: MEKKINEMYM TETVDIEQAL DVEEALHYYS RISSPVYLNI VDKFFTDLYS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.